FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6919-RA through 18771 annotations produced 3 hits

octopamine receptor 2 (oa2):

Annotation Number : HDC15018
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038980
Gbrowse : chr3R:18320566-18324478 (+) // 100.0 //
Probeset : 1640745_at
Accessions : protein= NP_001034064; /// NP_001163690; /// NP_651057;, nucleotide= NM_001038975; /// NM_001170219; /// NM_142800;
Pathway : coupled to cAMP nucleotide second messenger // inferred from direct assay /// 0007189 // activation of adenylate cyclas
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred
FlyMine data for FBgn0038980.
BDGP gene expression has embryonic in situ data for CG6919: 15 pix of staining in 7 body parts.
TRiP has 2 RNAi stocks for FBgn0038980 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038980 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	2 ± 0	1 of 4	2.00	None
Head	1 ± 0	0 of 4	1.20	None
Eye	3 ± 1	1 of 4	2.89	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	1.30	None
Salivary gland	7 ± 3	0 of 4	6.29	None
Crop	5 ± 1	1 of 4	4.70	None
Midgut	10 ± 1	1 of 4	8.90	Up
Tubule	3 ± 0	0 of 4	2.90	Up
Hindgut	2 ± 1	0 of 4	2.00	None
Heart	3 ± 1	0 of 4	3.51	None
Fat body	5 ± 3	0 of 4	4.56	None
Ovary	2 ± 0	0 of 4	2.30	None
Testis	1 ± 0	0 of 4	1.40	None
Male accessory glands	2 ± 0	0 of 4	1.80	None
Virgin spermatheca	6 ± 1	0 of 4	5.62	Up
Mated spermatheca	5 ± 1	0 of 4	4.47	None
Adult carcass	4 ± 1	0 of 4	4.10	Up
Larval CNS	0 ± 0	0 of 4	0.58	None
Larval Salivary gland	4 ± 1	0 of 4	3.67	None
Larval midgut	3 ± 1	0 of 4	3.02	None
Larval tubule	4 ± 1	0 of 4	4.00	None
Larval hindgut	3 ± 1	0 of 4	2.73	None
Larval fat body	2 ± 1	0 of 4	2.00	None
Larval trachea	3 ± 1	0 of 4	3.24	None
Larval carcass	2 ± 1	0 of 4	2.42	None
S2 cells (growing)	1 ± 0	0 of 4	1.18	None
Whole fly	1 ± 0	0 of 4

octopamine receptor 2 (oa2):

Annotation Number : S.C3R002441
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038980
Gbrowse : chr3R:18319921-18332136 (+) // 100.0 //
Probeset : 1635190_at
Accessions : protein= NP_001034064; /// NP_001163690; /// NP_651057;, nucleotide= NM_001038975; /// NM_001170219; /// NM_142800;
Pathway : coupled to cAMP nucleotide second messenger // inferred from direct assay /// 0007189 // activation of adenylate cyclas
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred
FlyMine data for FBgn0038980.
BDGP gene expression has embryonic in situ data for CG6919: 15 pix of staining in 7 body parts.
TRiP has 2 RNAi stocks for FBgn0038980 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038980 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	0 ± 0	0 of 4	1.00	None
Head	1 ± 0	0 of 4	2.30	None
Eye	5 ± 1	0 of 4	7.25	None
Thoracicoabdominal ganglion	1 ± 0	0 of 4	2.30	None
Salivary gland	8 ± 4	0 of 4	12.68	None
Crop	0 ± 0	0 of 4	1.10	None
Midgut	1 ± 0	0 of 4	1.50	None
Tubule	4 ± 0	0 of 4	5.70	Up
Hindgut	3 ± 1	0 of 4	4.20	None
Heart	2 ± 0	0 of 4	4.07	None
Fat body	1 ± 0	0 of 4	1.82	None
Ovary	0 ± 0	0 of 4	0.70	None
Testis	1 ± 0	0 of 4	1.40	None
Male accessory glands	2 ± 0	0 of 4	3.00	None
Virgin spermatheca	2 ± 0	0 of 4	4.04	None
Mated spermatheca	1 ± 0	0 of 4	1.89	None
Adult carcass	1 ± 0	0 of 4	2.10	None
Larval CNS	1 ± 1	0 of 4	2.64	None
Larval Salivary gland	6 ± 2	0 of 4	9.46	None
Larval midgut	1 ± 0	0 of 4	2.75	Up
Larval tubule	3 ± 1	0 of 4	5.30	None
Larval hindgut	1 ± 0	0 of 4	1.54	None
Larval fat body	2 ± 0	0 of 4	3.40	None
Larval trachea	5 ± 1	0 of 4	7.43	Up
Larval carcass	1 ± 0	0 of 4	2.64	None
S2 cells (growing)	1 ± 0	0 of 4	2.32	None
Whole fly	0 ± 0	0 of 4

octopamine receptor 2 (oa2):

Annotation Number : CG6919
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038980
Gbrowse : chr3R:18322938-18342971 (+) // 100.0 //
Probeset : 1626050_at
Accessions : protein= NP_001034064; /// NP_001163690; /// NP_651057;, nucleotide= NM_001038975; /// NM_001170219; /// NM_142800;
Pathway : coupled to cAMP nucleotide second messenger // inferred from direct assay /// 0007189 // activation of adenylate cyclas
Interpro : 0005886 // plasma membrane // inferred from electronic annotation /// 0005887 // integral to plasma membrane // inferred
FlyMine data for FBgn0038980.
BDGP gene expression has embryonic in situ data for CG6919: 15 pix of staining in 7 body parts.
Homophila reports that CG6919 is a close match (6e-11) to human gene GPR73L1;KAL3;PKR2;PROKR2 (NP_658986), a gene associated with Kallmann syndrome 3, 244200 (3).
TRiP has 2 RNAi stocks for FBgn0038980 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038980 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	324 ± 11	4 of 4	46.70	Up
Head	33 ± 5	2 of 4	4.80	Up
Eye	30 ± 2	4 of 4	4.38	Up
Thoracicoabdominal ganglion	128 ± 12	4 of 4	18.50	Up
Salivary gland	6 ± 2	0 of 4	0.91	None
Crop	1 ± 0	0 of 4	0.20	Down
Midgut	2 ± 0	0 of 4	0.30	None
Tubule	3 ± 0	0 of 4	0.50	Down
Hindgut	3 ± 1	0 of 4	0.50	None
Heart	0 ± 0	0 of 4	0.14	Down
Fat body	10 ± 5	0 of 4	1.49	None
Ovary	1 ± 0	0 of 4	0.20	Down
Testis	2 ± 0	0 of 4	0.30	None
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	13 ± 3	1 of 4	1.87	None
Mated spermatheca	14 ± 5	0 of 4	2.08	None
Adult carcass	2 ± 1	0 of 4	0.30	None
Larval CNS	125 ± 28	4 of 4	18.01	Up
Larval Salivary gland	4 ± 3	0 of 4	0.68	None
Larval midgut	7 ± 2	0 of 4	1.07	None
Larval tubule	3 ± 1	0 of 4	0.40	None
Larval hindgut	3 ± 1	0 of 4	0.48	None
Larval fat body	1 ± 0	0 of 4	0.20	Down
Larval trachea	4 ± 2	1 of 4	0.70	None
Larval carcass	1 ± 0	0 of 4	0.27	None
S2 cells (growing)	1 ± 0	0 of 4	0.15	Down
Whole fly	7 ± 1	0 of 4

Looking for CG6919-RA. 3 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720