FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6932-RA through 18771 annotations produced 1 hits

Drosophila COP9 signalosome homolog 6 (CSN6):

Annotation Number : CG6932
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0028837
Gbrowse : chr3R:18406496-18407760 (+) // 100.0 //
Probeset : 1636446_at
Accessions : protein= NP_524451;, nucleotide= NM_079727;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from electronic annotatio
Interpro : 0005515 // protein binding // inferred from physical interaction /// 0019781 // NEDD8 activating enzyme activity // infe
FlyMine data for FBgn0028837.
BDGP gene expression has embryonic in situ data for CSN6: 10 pix of staining in 15 body parts.
BioGrid reports that CG6932 interacts with CG8725 .
TRiP has 1 RNAi stocks for FBgn0028837 available for purchase.
VDRC has 3 RNAi stocks for FBgn0028837 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	98 ± 4	4 of 4	0.70	Down
Head	90 ± 4	4 of 4	0.60	Down
Eye	166 ± 9	4 of 4	1.19	None
Thoracicoabdominal ganglion	96 ± 2	4 of 4	0.70	Down
Salivary gland	64 ± 7	2 of 4	0.46	Down
Crop	115 ± 14	4 of 4	0.80	None
Midgut	98 ± 4	4 of 4	0.70	Down
Tubule	121 ± 5	4 of 4	0.90	Down
Hindgut	91 ± 3	4 of 4	0.70	Down
Heart	115 ± 7	4 of 4	0.82	Down
Fat body	114 ± 17	4 of 4	0.82	None
Ovary	240 ± 8	4 of 4	1.70	Up
Testis	114 ± 6	4 of 4	0.80	Down
Male accessory glands	80 ± 5	4 of 4	0.60	Down
Virgin spermatheca	136 ± 6	4 of 4	0.98	None
Mated spermatheca	110 ± 10	4 of 4	0.79	None
Adult carcass	103 ± 5	4 of 4	0.70	Down
Larval CNS	261 ± 9	4 of 4	1.87	Up
Larval Salivary gland	158 ± 5	4 of 4	1.13	None
Larval midgut	107 ± 3	4 of 4	0.77	Down
Larval tubule	175 ± 2	4 of 4	1.30	Up
Larval hindgut	124 ± 6	4 of 4	0.89	None
Larval fat body	164 ± 10	4 of 4	1.20	None
Larval trachea	174 ± 18	4 of 4	1.25	Up
Larval carcass	143 ± 7	4 of 4	1.03	None
S2 cells (growing)	230 ± 5	4 of 4	1.65	Up
Whole fly	139 ± 6	4 of 4

Looking for CG6932-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720