FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6944-RA through 18771 annotations produced 1 hits

chr2L:5542526-5546642 (+) // 100.0 // (Lamin):

Annotation Number : CG6944
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1636809_at
Accessions : protein= , nucleotide= NP_476616;
Pathway : "0001745 // compound eye morphogenesis // inferred from mutant phenotype /// 0006342 // chromatin silencing // inferred
Interpro : open tracheal system // inferred from mutant phenotype /// 0035262 // gonad morphogenesis // inferred from mutant pheno
FlyMine data for full length.
Homophila reports that CG6944 is a close match (4e-15) to human gene KRT10 (NP_000412), a gene associated with Epidermolytic hyperkeratosis, 113800 (3);Ichthyosis, cyclic, with epidermolytic hyperkeratosis, 607602 (3);Nevus, epidermal, epidermolytic hyperkeratotic type, 600648 (3).
BioGrid reports that CG6944 interacts with CG7069 CG7196 CG9986 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	269 ± 3	4 of 4	1.70	Up
Head	104 ± 7	4 of 4	0.60	Down
Eye	203 ± 6	4 of 4	1.27	Up
Thoracicoabdominal ganglion	218 ± 6	4 of 4	1.40	Up
Salivary gland	32 ± 6	2 of 4	0.20	Down
Crop	124 ± 6	4 of 4	0.80	Down
Midgut	51 ± 7	4 of 4	0.30	Down
Tubule	63 ± 4	4 of 4	0.40	Down
Hindgut	48 ± 4	4 of 4	0.30	Down
Heart	140 ± 4	4 of 4	0.87	None
Fat body	68 ± 21	4 of 4	0.43	Down
Ovary	228 ± 11	4 of 4	1.40	Up
Testis	222 ± 19	4 of 4	1.40	Up
Male accessory glands	262 ± 7	4 of 4	1.60	Up
Virgin spermatheca	85 ± 5	4 of 4	0.53	Down
Mated spermatheca	118 ± 5	4 of 4	0.74	Down
Adult carcass	67 ± 6	4 of 4	0.40	Down
Larval CNS	1501 ± 68	4 of 4	9.36	Up
Larval Salivary gland	142 ± 7	4 of 4	0.89	None
Larval midgut	95 ± 4	4 of 4	0.59	Down
Larval tubule	47 ± 8	4 of 4	0.30	Down
Larval hindgut	110 ± 9	4 of 4	0.69	Down
Larval fat body	70 ± 12	4 of 4	0.40	Down
Larval trachea	504 ± 37	4 of 4	3.14	Up
Larval carcass	134 ± 5	4 of 4	0.83	Down
S2 cells (growing)	940 ± 42	4 of 4	5.86	Up
Whole fly	160 ± 8	4 of 4

Looking for CG6944-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720