FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6957-RA through 18771 annotations produced 1 hits

Oscillin (Oscillin):

Annotation Number : CG6957
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031717
Gbrowse : chr2L:5547202-5549614 (+) // 100.0 //
Probeset : 1628828_s_at
Accessions : protein= NP_608938; /// NP_723092;, nucleotide= NM_135094; /// NM_164649;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
Interpro : 0004342 // glucosamine-6-phosphate deaminase activity // inferred from sequence or structural similarity /// 0004342 //
FlyMine data for FBgn0031717.
BDGP gene expression has embryonic in situ data for Oscillin: 24 pix of staining in 6 body parts.
VDRC has 1 RNAi stocks for FBgn0031717 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	94 ± 2	4 of 4	2.10	Up
Head	98 ± 5	4 of 4	2.20	Up
Eye	81 ± 4	4 of 4	1.81	Up
Thoracicoabdominal ganglion	82 ± 4	4 of 4	1.80	Up
Salivary gland	16 ± 5	0 of 4	0.36	Down
Crop	107 ± 7	4 of 4	2.40	Up
Midgut	97 ± 2	4 of 4	2.20	Up
Tubule	544 ± 29	4 of 4	12.10	Up
Hindgut	65 ± 2	4 of 4	1.50	Up
Heart	137 ± 5	4 of 4	3.04	Up
Fat body	147 ± 20	4 of 4	3.26	Up
Ovary	12 ± 1	0 of 4	0.30	Down
Testis	99 ± 3	4 of 4	2.20	Up
Male accessory glands	7 ± 3	0 of 4	0.20	Down
Virgin spermatheca	323 ± 26	4 of 4	7.16	Up
Mated spermatheca	245 ± 35	4 of 4	5.44	Up
Adult carcass	97 ± 4	4 of 4	2.20	Up
Larval CNS	81 ± 16	4 of 4	1.80	Up
Larval Salivary gland	116 ± 23	4 of 4	2.58	None
Larval midgut	250 ± 17	4 of 4	5.55	Up
Larval tubule	1112 ± 47	4 of 4	24.70	Up
Larval hindgut	117 ± 10	4 of 4	2.60	Up
Larval fat body	1243 ± 156	4 of 4	27.60	Up
Larval trachea	140 ± 23	4 of 4	3.11	Up
Larval carcass	229 ± 47	4 of 4	5.09	Up
S2 cells (growing)	66 ± 1	4 of 4	1.48	Up
Whole fly	45 ± 2	4 of 4

Looking for CG6957-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720