FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6992-RI through 18771 annotations produced 1 hits

glutamate receptor (GluRIIA):

Annotation Number : CG6992
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0004620
Gbrowse : chr2L:5555073-5558994 (+) // 100.0 //
Probeset : 1630710_at
Accessions : protein= NP_523484;, nucleotide= NM_078760;
Pathway : 0005886 // plasma membrane // inferred from direct assay /// 0005886 // plasma membrane // inferred from sequence or str
Interpro : 0004872 // receptor activity // inferred from electronic annotation /// 0004970 // ionotropic glutamate receptor activit
FlyMine data for FBgn0004620.
BDGP gene expression has embryonic in situ data for Glu-RIIA: 10 pix of staining in 3 body parts.
Homophila reports that CG6992 is a close match (2e-101) to human gene GLUR3;GRIA3;MRX94 (NP_000819), a gene associated with Mental retardation, X-linked 94, 300699 (3).
BioGrid reports that CG6992 interacts with CG32592 .
TRiP has 1 RNAi stocks for FBgn0004620 available for purchase.
VDRC has 1 RNAi stocks for FBgn0004620 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	37 ± 0	4 of 4	2.30	Up
Head	19 ± 1	4 of 4	1.20	None
Eye	13 ± 2	3 of 4	0.78	None
Thoracicoabdominal ganglion	27 ± 3	4 of 4	1.60	None
Salivary gland	9 ± 4	0 of 4	0.57	None
Crop	42 ± 2	4 of 4	2.50	Up
Midgut	20 ± 2	4 of 4	1.20	None
Tubule	38 ± 2	3 of 4	2.30	Up
Hindgut	67 ± 2	4 of 4	4.00	Up
Heart	135 ± 13	4 of 4	8.08	Up
Fat body	14 ± 2	2 of 4	0.87	None
Ovary	3 ± 0	0 of 4	0.20	Down
Testis	11 ± 1	4 of 4	0.70	None
Male accessory glands	28 ± 2	4 of 4	1.70	Up
Virgin spermatheca	16 ± 0	4 of 4	1.00	None
Mated spermatheca	25 ± 2	4 of 4	1.53	None
Adult carcass	31 ± 5	4 of 4	1.90	None
Larval CNS	4 ± 1	1 of 4	0.24	Down
Larval Salivary gland	4 ± 1	0 of 4	0.25	Down
Larval midgut	21 ± 1	4 of 4	1.29	None
Larval tubule	56 ± 4	4 of 4	3.40	Up
Larval hindgut	45 ± 4	4 of 4	2.69	Up
Larval fat body	5 ± 2	0 of 4	0.40	Down
Larval trachea	8 ± 7	0 of 4	0.49	None
Larval carcass	132 ± 10	4 of 4	7.89	Up
S2 cells (growing)	4 ± 1	0 of 4	0.27	Down
Whole fly	16 ± 3	3 of 4

Looking for CG6992-RI. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720