FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG6998-RB through 18771 annotations produced 2 hits

dynein (ctp):

Annotation Number : CG6998
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011760
Gbrowse : chrX:4581833-4593498 (+) // 100.0 //
Probeset : 1623073_s_at
Accessions : protein= NP_525075; /// NP_726942; /// NP_726943; /// NP_726944;, nucleotide= NM_080336; /// NM_167014; /// NM_167015; /// NM_167016;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0
Interpro : "0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred
FlyMine data for FBgn0011760.
BDGP gene expression has embryonic in situ data for ctp: 20 pix of staining in 12 body parts.
BioGrid reports that CG6998 interacts with CG7435 CG7987 CG8262 CG9754 CG9772 CG9986 .
VDRC has 3 RNAi stocks for FBgn0011760 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1892 ± 66	4 of 4	1.60	Up
Head	1382 ± 63	4 of 4	1.10	None
Eye	2028 ± 84	4 of 4	1.68	Up
Thoracicoabdominal ganglion	1716 ± 93	4 of 4	1.40	Up
Salivary gland	2478 ± 133	4 of 4	2.05	Up
Crop	2037 ± 60	4 of 4	1.70	Up
Midgut	1362 ± 27	4 of 4	1.10	Up
Tubule	1703 ± 21	4 of 4	1.40	Up
Hindgut	1647 ± 9	4 of 4	1.40	Up
Heart	1569 ± 15	4 of 4	1.30	Up
Fat body	1702 ± 78	4 of 4	1.41	Up
Ovary	1780 ± 21	4 of 4	1.50	Up
Testis	919 ± 20	4 of 4	0.80	Down
Male accessory glands	2271 ± 69	4 of 4	1.90	Up
Virgin spermatheca	2010 ± 98	4 of 4	1.66	Up
Mated spermatheca	2138 ± 111	4 of 4	1.77	Up
Adult carcass	1324 ± 65	4 of 4	1.10	None
Larval CNS	1839 ± 176	4 of 4	1.52	Up
Larval Salivary gland	2478 ± 31	4 of 4	2.05	Up
Larval midgut	2075 ± 72	4 of 4	1.72	Up
Larval tubule	1963 ± 34	4 of 4	1.60	Up
Larval hindgut	2043 ± 46	4 of 4	1.69	Up
Larval fat body	1820 ± 100	4 of 4	1.50	Up
Larval trachea	2092 ± 125	4 of 4	1.73	Up
Larval carcass	2338 ± 138	4 of 4	1.94	Up
S2 cells (growing)	1898 ± 14	4 of 4	1.57	Up
Whole fly	1208 ± 49	4 of 4

dynein (ctp):

Annotation Number : S.CX000506
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0011760
Gbrowse : chrX:4592530-4593025 (+) // 100.0 //
Probeset : 1634599_s_at
Accessions : protein= NP_525075; /// NP_726942; /// NP_726943; /// NP_726944;, nucleotide= NM_080336; /// NM_167014; /// NM_167015; /// NM_167016;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation /// 0
Interpro : "0003774 // motor activity // inferred from electronic annotation /// 0003777 // microtubule motor activity // inferred
FlyMine data for FBgn0011760.
BDGP gene expression has embryonic in situ data for ctp: 20 pix of staining in 12 body parts.
VDRC has 3 RNAi stocks for FBgn0011760 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1802 ± 52	4 of 4	2.80	Up
Head	847 ± 59	4 of 4	1.30	Up
Eye	1170 ± 62	4 of 4	1.82	Up
Thoracicoabdominal ganglion	1177 ± 120	4 of 4	1.80	Up
Salivary gland	489 ± 8	4 of 4	0.76	Down
Crop	999 ± 13	4 of 4	1.60	Up
Midgut	734 ± 23	4 of 4	1.10	Up
Tubule	649 ± 10	4 of 4	1.00	None
Hindgut	929 ± 19	4 of 4	1.40	Up
Heart	771 ± 26	4 of 4	1.20	Up
Fat body	603 ± 64	4 of 4	0.94	None
Ovary	943 ± 17	4 of 4	1.50	Up
Testis	505 ± 11	4 of 4	0.80	Down
Male accessory glands	885 ± 15	4 of 4	1.40	Up
Virgin spermatheca	389 ± 7	4 of 4	0.61	Down
Mated spermatheca	436 ± 33	4 of 4	0.68	Down
Adult carcass	616 ± 22	4 of 4	1.00	None
Larval CNS	1090 ± 50	4 of 4	1.70	Up
Larval Salivary gland	965 ± 42	4 of 4	1.50	Up
Larval midgut	624 ± 22	4 of 4	0.97	None
Larval tubule	1041 ± 18	4 of 4	1.60	Up
Larval hindgut	873 ± 34	4 of 4	1.36	Up
Larval fat body	666 ± 26	4 of 4	1.00	None
Larval trachea	1053 ± 138	4 of 4	1.64	Up
Larval carcass	1021 ± 45	4 of 4	1.59	Up
S2 cells (growing)	1334 ± 45	4 of 4	2.08	Up
Whole fly	642 ± 21	4 of 4

Looking for CG6998-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720