FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7028-RA through 18771 annotations produced 1 hits

(CG7028):

Annotation Number : CG7028
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0027587
Gbrowse : chr3L:207883-211462 (-) // 100.0 //
Probeset : 1640619_at
Accessions : protein= NP_612010;, nucleotide= NM_138166;
Pathway : via spliceosome // inferred by curator /// 0006468 // protein phosphorylation // inferred from electronic annotation //
Interpro : 0071011 // precatalytic spliceosome // inferred from direct assay /// 0071013 // catalytic step 2 spliceosome // inferre
FlyMine data for FBgn0027587.
BDGP gene expression has embryonic in situ data for BcDNA:GH04978: 2 pix of staining in 1 body parts.
Homophila reports that CG7028 is a close match (2e-15) to human gene CDK4;CMM3 (NP_000066), a gene associated with Melanoma, 609048 (3).
BioGrid reports that CG7028 interacts with CG3018 CG33553 .
TRiP has 1 RNAi stocks for FBgn0027587 available for purchase.
VDRC has 3 RNAi stocks for FBgn0027587 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	242 ± 4	4 of 4	1.30	Up
Head	142 ± 6	4 of 4	0.80	None
Eye	107 ± 6	4 of 4	0.59	Down
Thoracicoabdominal ganglion	198 ± 5	4 of 4	1.10	None
Salivary gland	181 ± 9	4 of 4	0.99	None
Crop	182 ± 6	4 of 4	1.00	None
Midgut	126 ± 5	4 of 4	0.70	Down
Tubule	170 ± 4	4 of 4	0.90	Down
Hindgut	125 ± 5	4 of 4	0.70	Down
Heart	116 ± 2	4 of 4	0.64	Down
Fat body	141 ± 13	4 of 4	0.77	None
Ovary	414 ± 8	4 of 4	2.30	Up
Testis	69 ± 2	4 of 4	0.40	Down
Male accessory glands	165 ± 9	4 of 4	0.90	None
Virgin spermatheca	147 ± 4	4 of 4	0.81	None
Mated spermatheca	180 ± 11	4 of 4	0.99	None
Adult carcass	120 ± 2	4 of 4	0.70	Down
Larval CNS	322 ± 19	4 of 4	1.77	Up
Larval Salivary gland	207 ± 4	4 of 4	1.14	None
Larval midgut	86 ± 3	4 of 4	0.47	Down
Larval tubule	155 ± 2	4 of 4	0.80	None
Larval hindgut	127 ± 8	4 of 4	0.70	Down
Larval fat body	143 ± 8	4 of 4	0.80	None
Larval trachea	205 ± 25	4 of 4	1.12	None
Larval carcass	168 ± 13	4 of 4	0.92	None
S2 cells (growing)	130 ± 2	4 of 4	0.71	None
Whole fly	182 ± 17	4 of 4

Looking for CG7028-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720