FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7035-RB through 18771 annotations produced 2 hits

cap binding protein 80 (Cbp80):

Annotation Number : CG7035
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022942
Gbrowse : chrX:4544053-4552292 (+) // 100.0 //
Probeset : 1623101_at
Accessions : protein= NP_524750; /// NP_726938;, nucleotide= NM_080011; /// NM_167012;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0006370 // mRNA capping // inferred from electro
FlyMine data for FBgn0022942.
BDGP gene expression has embryonic in situ data for Cbp80: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0022942 available for purchase.
VDRC has 3 RNAi stocks for FBgn0022942 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	99 ± 8	4 of 4	5.70	Up
Head	38 ± 6	4 of 4	2.20	Up
Eye	16 ± 3	3 of 4	0.95	None
Thoracicoabdominal ganglion	77 ± 5	4 of 4	4.40	Up
Salivary gland	15 ± 4	2 of 4	0.85	None
Crop	29 ± 2	4 of 4	1.70	Up
Midgut	6 ± 1	2 of 4	0.40	Down
Tubule	15 ± 1	4 of 4	0.90	None
Hindgut	12 ± 1	4 of 4	0.70	None
Heart	5 ± 1	2 of 4	0.33	Down
Fat body	17 ± 0	4 of 4	0.98	None
Ovary	31 ± 1	4 of 4	1.80	Up
Testis	3 ± 0	0 of 4	0.20	Down
Male accessory glands	14 ± 1	1 of 4	0.80	None
Virgin spermatheca	12 ± 1	4 of 4	0.69	None
Mated spermatheca	15 ± 1	4 of 4	0.89	None
Adult carcass	8 ± 2	2 of 4	0.50	Down
Larval CNS	154 ± 35	4 of 4	8.78	Up
Larval Salivary gland	39 ± 2	4 of 4	2.26	Up
Larval midgut	10 ± 2	3 of 4	0.59	None
Larval tubule	20 ± 4	4 of 4	1.20	None
Larval hindgut	29 ± 2	4 of 4	1.65	Up
Larval fat body	20 ± 1	4 of 4	1.20	None
Larval trachea	15 ± 4	4 of 4	0.87	None
Larval carcass	31 ± 2	4 of 4	1.79	Up
S2 cells (growing)	22 ± 2	4 of 4	1.29	None
Whole fly	17 ± 1	4 of 4

cap binding protein 80 (Cbp80):

Annotation Number : CG7035
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0022942
Gbrowse : chrX:4544053-4552041 (+) // 100.0 //
Probeset : 1636071_a_at
Accessions : protein= NP_524750; /// NP_726938;, nucleotide= NM_080011; /// NM_167012;
Pathway : via spliceosome // inferred by curator /// 0000398 // nuclear mRNA splicing
Interpro : via spliceosome // inferred from sequence or structural similarity /// 0006370 // mRNA capping // inferred from electro
FlyMine data for FBgn0022942.
BDGP gene expression has embryonic in situ data for Cbp80: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0022942 available for purchase.
VDRC has 3 RNAi stocks for FBgn0022942 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	120 ± 1	4 of 4	0.70	Down
Head	98 ± 3	4 of 4	0.50	Down
Eye	74 ± 4	4 of 4	0.41	Down
Thoracicoabdominal ganglion	112 ± 2	4 of 4	0.60	Down
Salivary gland	154 ± 5	4 of 4	0.85	Down
Crop	147 ± 5	4 of 4	0.80	Down
Midgut	122 ± 4	4 of 4	0.70	Down
Tubule	85 ± 8	4 of 4	0.50	Down
Hindgut	113 ± 3	4 of 4	0.60	Down
Heart	126 ± 4	4 of 4	0.70	Down
Fat body	158 ± 19	4 of 4	0.87	None
Ovary	313 ± 4	4 of 4	1.70	Up
Testis	19 ± 2	2 of 4	0.10	Down
Male accessory glands	168 ± 5	4 of 4	0.90	None
Virgin spermatheca	108 ± 10	4 of 4	0.60	Down
Mated spermatheca	122 ± 2	4 of 4	0.67	Down
Adult carcass	122 ± 3	4 of 4	0.70	Down
Larval CNS	328 ± 8	4 of 4	1.81	Up
Larval Salivary gland	302 ± 6	4 of 4	1.66	Up
Larval midgut	106 ± 5	4 of 4	0.58	Down
Larval tubule	184 ± 12	4 of 4	1.00	None
Larval hindgut	185 ± 7	4 of 4	1.02	None
Larval fat body	125 ± 10	4 of 4	0.70	Down
Larval trachea	212 ± 19	4 of 4	1.17	None
Larval carcass	239 ± 10	4 of 4	1.32	Up
S2 cells (growing)	213 ± 9	4 of 4	1.18	Up
Whole fly	182 ± 8	4 of 4

Looking for CG7035-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720