Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7081-RA through 18771 annotations produced 1 hits



peroxin 2 (pex2):

Annotation Number : CG7081
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035876
Gbrowse : chr3L:8332152-8333380 (+) // 100.0 //
Probeset : 1624888_at
Accessions : protein= NP_648210;, nucleotide= NM_139953;
Pathway : 0005778 // peroxisomal membrane // inferred from sequence or structural similarity /// 0005778 // peroxisomal membrane /
Interpro : 0005515 // protein binding // inferred from electronic annotation /// 0008270 // zinc ion binding // inferred from elect
FlyMine data for FBgn0035876.
Homophila reports that CG7081 is a close match (1e-32) to human gene PAF1;PEX2;PMP35;PXMP3 (NP_001073336), a gene associated with Refsum disease, infantile form, 266510 (3);Zellweger syndrome-3 (3).
VDRC has 2 RNAi stocks for FBgn0035876 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain72 04 of 4 0.60Down
Head121 54 of 4 1.10None
Eye116 64 of 4 1.01None
Thoracicoabdominal ganglion57 14 of 4 0.50Down
Salivary gland82 44 of 4 0.72Down
Crop325 64 of 4 2.80Up
Midgut120 54 of 4 1.10None
Tubule219 144 of 4 1.90Up
Hindgut136 24 of 4 1.20Up
Heart396 114 of 4 3.45Up
Fat body347 244 of 4 3.02Up
Ovary223 14 of 4 1.90Up
Testis6 13 of 4 0.10Down
Male accessory glands48 14 of 4 0.40Down
Virgin spermatheca166 44 of 4 1.45Up
Mated spermatheca153 64 of 4 1.34Up
Adult carcass244 114 of 4 2.10Up
Larval CNS83 34 of 4 0.73Down
Larval Salivary gland77 64 of 4 0.67Down
Larval midgut77 54 of 4 0.67Down
Larval tubule165 84 of 4 1.40Up
Larval hindgut60 34 of 4 0.53Down
Larval fat body106 154 of 4 0.90None
Larval trachea82 44 of 4 0.72Down
Larval carcass43 14 of 4 0.38Down
S2 cells (growing)66 34 of 4 0.58Down
Whole fly114 34 of 4

Looking for CG7081-RA. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime