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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7134-RA through 18771 annotations produced 1 hits



CG7134 (cdc14):

Annotation Number : CG7134
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031952
Gbrowse : chr2L:7802486-7810697 (-) // 100.0 //
Probeset : 1633153_at
Accessions : protein= NP_001162904; /// NP_001162905; /// NP_609153;, nucleotide= NM_001169433; /// NM_001169434; /// NM_135309;
Interpro : 0004725 // protein tyrosine phosphatase activity // inferred from electronic annotation /// 0005515 // protein binding /
FlyMine data for FBgn0031952.
BioGrid reports that CG7134 interacts with CG9188 CG2944 CG14816 CG3629 CG13806 CG32139 CG5473 CG31000 CG32045 CG5568 CG5731 CG15218 CG1034 CG4673 CG15112 CG11486 CG4184 CG13900 CG1765 .
TRiP has 1 RNAi stocks for FBgn0031952 available for purchase.
VDRC has 3 RNAi stocks for FBgn0031952 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain85 ± 24 of 4 1.50Up
Head36 ± 74 of 4 0.60None
Eye57 ± 24 of 4 1.02None
Thoracicoabdominal ganglion74 ± 84 of 4 1.30None
Salivary gland29 ± 21 of 4 0.53Down
Crop52 ± 63 of 4 0.90None
Midgut29 ± 11 of 4 0.50Down
Tubule11 ± 00 of 4 0.20Down
Hindgut41 ± 24 of 4 0.70None
Heart28 ± 14 of 4 0.50Down
Fat body21 ± 42 of 4 0.38Down
Ovary55 ± 34 of 4 1.00None
Testis592 ± 204 of 410.50Up
Male accessory glands67 ± 62 of 4 1.20None
Virgin spermatheca15 ± 20 of 4 0.28Down
Mated spermatheca25 ± 31 of 4 0.45Down
Adult carcass32 ± 51 of 4 0.60Down
Larval CNS38 ± 74 of 4 0.69None
Larval Salivary gland62 ± 82 of 4 1.11None
Larval midgut19 ± 10 of 4 0.35Down
Larval tubule12 ± 10 of 4 0.20Down
Larval hindgut28 ± 14 of 4 0.51Down
Larval fat body57 ± 142 of 4 1.00None
Larval trachea45 ± 114 of 4 0.81None
Larval carcass26 ± 40 of 4 0.47Down
S2 cells (growing)29 ± 00 of 4 0.53Down
Whole fly56 ± 74 of 4

Looking for CG7134-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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