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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7144-RA through 18771 annotations produced 1 hits



CG7144 (LKR):

Annotation Number : CG7144
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025687
Gbrowse : chr2L:7791405-7795958 (-) // 100.0 //
Probeset : 1623787_at
Accessions : protein= NP_609150;, nucleotide= NM_135306;
Interpro : "0003824 // catalytic activity // inferred from electronic annotation /// 0004754 // saccharopine dehydrogenase (NAD+
FlyMine data for FBgn0025687.
Homophila reports that CG7144 is a close match (0) to human gene AASS (NP_005754), a gene associated with Hyperlysinemia, 238700 (3);Saccharopinuria, 268700 (1).
TRiP has 1 RNAi stocks for FBgn0025687 available for purchase.
VDRC has 2 RNAi stocks for FBgn0025687 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain35 ± 14 of 4 0.70Down
Head100 ± 174 of 4 2.10None
Eye56 ± 144 of 4 1.18None
Thoracicoabdominal ganglion33 ± 04 of 4 0.70Down
Salivary gland37 ± 32 of 4 0.80Down
Crop25 ± 24 of 4 0.50Down
Midgut55 ± 34 of 4 1.20None
Tubule1193 ± 374 of 425.20Up
Hindgut39 ± 14 of 4 0.80Down
Heart155 ± 194 of 4 3.27Up
Fat body328 ± 244 of 4 6.94Up
Ovary4 ± 10 of 4 0.10Down
Testis13 ± 33 of 4 0.30Down
Male accessory glands58 ± 13 of 4 1.20Up
Virgin spermatheca390 ± 214 of 4 8.24Up
Mated spermatheca377 ± 154 of 4 7.97Up
Adult carcass182 ± 104 of 4 3.80Up
Larval CNS47 ± 64 of 4 1.01None
Larval Salivary gland88 ± 94 of 4 1.87Up
Larval midgut210 ± 244 of 4 4.44Up
Larval tubule255 ± 224 of 4 5.40Up
Larval hindgut38 ± 14 of 4 0.80Down
Larval fat body255 ± 234 of 4 5.40Up
Larval trachea34 ± 14 of 4 0.73Down
Larval carcass35 ± 34 of 4 0.76Down
S2 cells (growing)862 ± 174 of 418.20Up
Whole fly47 ± 24 of 4

Looking for CG7144-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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