FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7163-RA through 18771 annotations produced 1 hits

/// monkey-king (CG33057 /// mkg-p):

Annotation Number : CG7163
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035889 /// FBgn0053057
Gbrowse : chr3L:8395406-8398372 (-) // 100.0 //
Probeset : 1622892_s_at
Accessions : protein= NP_648219; /// NP_729375; /// NP_788477;, nucleotide= NM_139962; /// NM_168272; /// NM_176299;
Pathway : via endonucleolytic cleavage and ligation // inferred from electronic annotation /// 0006388 // tRNA splicing
Interpro : via endonucleolytic cleavage and ligation // inferred from sequence or structural similarity"
FlyMine data for FBgn0035889 /// FBgn0053057.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	114 ± 3	4 of 4	1.20	Up
Head	64 ± 1	4 of 4	0.70	Down
Eye	76 ± 2	4 of 4	0.83	None
Thoracicoabdominal ganglion	89 ± 2	4 of 4	1.00	None
Salivary gland	89 ± 8	4 of 4	0.97	None
Crop	87 ± 2	4 of 4	0.90	None
Midgut	53 ± 4	4 of 4	0.60	Down
Tubule	52 ± 2	4 of 4	0.60	Down
Hindgut	72 ± 5	4 of 4	0.80	Down
Heart	51 ± 2	4 of 4	0.55	Down
Fat body	67 ± 6	4 of 4	0.73	Down
Ovary	145 ± 5	4 of 4	1.60	Up
Testis	586 ± 17	4 of 4	6.30	Up
Male accessory glands	110 ± 5	4 of 4	1.20	None
Virgin spermatheca	55 ± 3	4 of 4	0.60	Down
Mated spermatheca	60 ± 4	4 of 4	0.65	Down
Adult carcass	84 ± 5	4 of 4	0.90	None
Larval CNS	128 ± 2	4 of 4	1.38	Up
Larval Salivary gland	63 ± 4	4 of 4	0.69	Down
Larval midgut	37 ± 2	4 of 4	0.40	Down
Larval tubule	67 ± 2	4 of 4	0.70	Down
Larval hindgut	60 ± 2	4 of 4	0.65	Down
Larval fat body	71 ± 16	4 of 4	0.80	None
Larval trachea	99 ± 2	4 of 4	1.07	None
Larval carcass	69 ± 3	4 of 4	0.75	Down
S2 cells (growing)	127 ± 2	4 of 4	1.37	Up
Whole fly	93 ± 6	4 of 4

Looking for CG7163-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720