FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7176-RA through 18771 annotations produced 1 hits

NADP-IDH (Idh):

Annotation Number : CG7176
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001248
Gbrowse : chr3L:8349502-8354031 (-) // 100.0 //
Probeset : 1634314_s_at
Accessions : protein= NP_001137910; /// NP_001137911; /// NP_652044; /// NP_729366; /// NP_729367; /// NP_729368; /// NP_729369; /// NP_729370; /// NP_788476;, nucleotide= NM_001144438; /// NM_001144439; /// NM_143787; /// NM_168265; /// NM_168266; /// NM_168267; /// NM_168268; /// NM_168269; /// NM_176298;
Pathway : 0005739 // mitochondrion // inferred from sequence or structural similarity /// 0005811 // lipid particle // inferred fr
Interpro : "0000287 // magnesium ion binding // inferred from electronic annotation /// 0004450 // isocitrate dehydrogenase (NADP+)
FlyMine data for FBgn0001248.
BDGP gene expression has embryonic in situ data for Idh: 16 pix of staining in 14 body parts.
TRiP has 1 RNAi stocks for FBgn0001248 available for purchase.
VDRC has 3 RNAi stocks for FBgn0001248 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	752 ± 10	4 of 4	0.40	Down
Head	2270 ± 74	4 of 4	1.20	Up
Eye	1372 ± 83	4 of 4	0.75	Down
Thoracicoabdominal ganglion	1069 ± 37	4 of 4	0.60	Down
Salivary gland	771 ± 24	4 of 4	0.42	Down
Crop	4450 ± 146	4 of 4	2.40	Up
Midgut	3687 ± 96	4 of 4	2.00	Up
Tubule	2818 ± 215	4 of 4	1.50	Up
Hindgut	3397 ± 42	4 of 4	1.90	Up
Heart	4020 ± 167	4 of 4	2.20	Up
Fat body	4648 ± 405	4 of 4	2.54	Up
Ovary	1207 ± 16	4 of 4	0.70	Down
Testis	973 ± 25	4 of 4	0.50	Down
Male accessory glands	1556 ± 72	4 of 4	0.90	Down
Virgin spermatheca	2444 ± 174	4 of 4	1.34	Up
Mated spermatheca	2033 ± 66	4 of 4	1.11	None
Adult carcass	4222 ± 97	4 of 4	2.30	Up
Larval CNS	1228 ± 10	4 of 4	0.67	Down
Larval Salivary gland	1533 ± 22	4 of 4	0.84	Down
Larval midgut	2286 ± 74	4 of 4	1.25	Up
Larval tubule	1013 ± 21	4 of 4	0.60	Down
Larval hindgut	1525 ± 51	4 of 4	0.83	Down
Larval fat body	1195 ± 133	4 of 4	0.70	Down
Larval trachea	2142 ± 155	4 of 4	1.17	Up
Larval carcass	2183 ± 86	4 of 4	1.19	Up
S2 cells (growing)	1344 ± 9	4 of 4	0.74	Down
Whole fly	1828 ± 79	4 of 4

Looking for CG7176-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720