Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7246-RA through 18771 annotations produced 1 hits



(CG7246):

Annotation Number : CG7246
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030081
Gbrowse : chrX:8972853-8975075 (-) // 100.0 //
Probeset : 1624103_at
Accessions : protein= NP_572520;, nucleotide= NM_132292;
Pathway : 0005622 // intracellular // inferred from electronic annotation
FlyMine data for FBgn0030081.
VDRC has 1 RNAi stocks for FBgn0030081 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain26 04 of 4 0.40Down
Head30 24 of 4 0.50Down
Eye25 14 of 4 0.38Down
Thoracicoabdominal ganglion36 14 of 4 0.50Down
Salivary gland41 84 of 4 0.61Down
Crop33 14 of 4 0.50Down
Midgut35 34 of 4 0.50Down
Tubule31 44 of 4 0.50Down
Hindgut23 14 of 4 0.30Down
Heart13 04 of 4 0.20Down
Fat body29 14 of 4 0.43Down
Ovary155 24 of 4 2.30Up
Testis21 04 of 4 0.30Down
Male accessory glands59 34 of 4 0.90None
Virgin spermatheca30 14 of 4 0.45Down
Mated spermatheca39 24 of 4 0.58Down
Adult carcass35 33 of 4 0.50Down
Larval CNS75 64 of 4 1.11None
Larval Salivary gland54 24 of 4 0.80Down
Larval midgut29 24 of 4 0.43Down
Larval tubule20 14 of 4 0.30Down
Larval hindgut33 24 of 4 0.49Down
Larval fat body21 11 of 4 0.30Down
Larval trachea48 84 of 4 0.71Down
Larval carcass56 104 of 4 0.82None
S2 cells (growing)78 44 of 4 1.16None
Whole fly68 14 of 4

Looking for CG7246-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime