FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7250-RA through 18771 annotations produced 1 hits

Toll-6 (Toll-6):

Annotation Number : CG7250
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036494
Gbrowse : chr3L:15329799-15335311 (+) // 100.0 //
Probeset : 1624790_at
Accessions : protein= NP_524081;, nucleotide= NM_079357;
Pathway : 0005886 // plasma membrane // non-traceable author statement /// 0016020 // membrane // inferred from electronic annotat
Interpro : 0004888 // transmembrane receptor activity // inferred from electronic annotation /// 0004888 // transmembrane receptor
FlyMine data for FBgn0036494.
BDGP gene expression has embryonic in situ data for Toll-6: 31 pix of staining in 17 body parts.
Homophila reports that CG7250 is a close match (4e-12) to human gene TLR1;TIL (NP_003254), a gene associated with {Leprosy, protection against}, 246300 (3).
BioGrid reports that CG7250 interacts with CG7856 .
VDRC has 6 RNAi stocks for FBgn0036494 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	62 ± 7	4 of 4	13.10	Up
Head	4 ± 1	1 of 4	1.00	None
Eye	3 ± 0	0 of 4	0.83	None
Thoracicoabdominal ganglion	36 ± 2	4 of 4	7.80	Up
Salivary gland	5 ± 3	0 of 4	1.11	None
Crop	4 ± 2	0 of 4	0.90	None
Midgut	0 ± 0	0 of 4	0.20	None
Tubule	1 ± 0	0 of 4	0.30	Down
Hindgut	0 ± 0	0 of 4	0.10	None
Heart	1 ± 0	0 of 4	0.23	None
Fat body	5 ± 1	1 of 4	1.10	None
Ovary	1 ± 0	0 of 4	0.30	None
Testis	2 ± 0	0 of 4	0.40	None
Male accessory glands	3 ± 2	0 of 4	0.70	None
Virgin spermatheca	5 ± 1	0 of 4	1.11	None
Mated spermatheca	3 ± 1	0 of 4	0.75	None
Adult carcass	1 ± 0	0 of 4	0.20	None
Larval CNS	28 ± 5	4 of 4	6.07	Up
Larval Salivary gland	0 ± 0	0 of 4	0.19	None
Larval midgut	4 ± 1	0 of 4	0.89	None
Larval tubule	2 ± 1	1 of 4	0.60	None
Larval hindgut	1 ± 0	0 of 4	0.29	None
Larval fat body	2 ± 1	0 of 4	0.40	None
Larval trachea	2 ± 1	0 of 4	0.49	None
Larval carcass	0 ± 0	0 of 4	0.19	None
S2 cells (growing)	0 ± 0	0 of 4	0.15	None
Whole fly	4 ± 1	0 of 4

Looking for CG7250-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720