Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7332-RA through 18771 annotations produced 1 hits



(CG7332):

Annotation Number : CG7332
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0030973
Gbrowse : chrX:18778534-18781638 (+) // 99.22 //
Probeset : 1632510_at
Accessions : protein= NP_573338;, nucleotide= NM_133110;
Interpro : 0005509 // calcium ion binding // inferred from electronic annotation
FlyMine data for FBgn0030973.
BDGP gene expression has embryonic in situ data for CG7332: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0030973 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain163 ± 54 of 4 1.50Up
Head117 ± 84 of 4 1.00None
Eye364 ± 344 of 4 3.24Up
Thoracicoabdominal ganglion156 ± 24 of 4 1.40Up
Salivary gland140 ± 64 of 4 1.25Up
Crop106 ± 54 of 4 0.90None
Midgut75 ± 34 of 4 0.70Down
Tubule107 ± 14 of 4 1.00Down
Hindgut77 ± 34 of 4 0.70Down
Heart111 ± 124 of 4 1.00None
Fat body51 ± 74 of 4 0.46Down
Ovary149 ± 54 of 4 1.30Up
Testis112 ± 54 of 4 1.00None
Male accessory glands102 ± 114 of 4 0.90None
Virgin spermatheca67 ± 14 of 4 0.60Down
Mated spermatheca65 ± 54 of 4 0.58Down
Adult carcass84 ± 54 of 4 0.80Down
Larval CNS77 ± 84 of 4 0.69Down
Larval Salivary gland67 ± 34 of 4 0.60Down
Larval midgut52 ± 34 of 4 0.47Down
Larval tubule78 ± 24 of 4 0.70Down
Larval hindgut56 ± 24 of 4 0.51Down
Larval fat body61 ± 24 of 4 0.50Down
Larval trachea107 ± 44 of 4 0.96None
Larval carcass45 ± 14 of 4 0.40Down
S2 cells (growing)109 ± 54 of 4 0.97None
Whole fly112 ± 74 of 4

Looking for CG7332-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime