Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7370-RA through 18771 annotations produced 1 hits



(CG7370):

Annotation Number : CG7370
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037133
Gbrowse : chr3L:21762914-21764426 (+) // 100.0 //
Probeset : 1631707_at
Accessions : protein= NP_649363;, nucleotide= NM_141106;
FlyMine data for FBgn0037133.
BDGP gene expression has embryonic in situ data for CG7370: 4 pix of staining in 1 body parts.
VDRC has 2 RNAi stocks for FBgn0037133 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 11 of 4 2.50Up
Head4 ± 10 of 4 2.20None
Eye3 ± 11 of 4 1.58None
Thoracicoabdominal ganglion4 ± 10 of 4 1.90None
Salivary gland12 ± 40 of 4 5.99None
Crop3 ± 00 of 4 1.50None
Midgut3 ± 10 of 4 1.60None
Tubule7 ± 11 of 4 3.60Up
Hindgut4 ± 10 of 4 2.10None
Heart4 ± 00 of 4 1.88None
Fat body15 ± 72 of 4 7.40Up
Ovary3 ± 10 of 4 1.40None
Testis3 ± 00 of 4 1.40None
Male accessory glands8 ± 41 of 4 3.80None
Virgin spermatheca7 ± 10 of 4 3.27Up
Mated spermatheca10 ± 21 of 4 4.75None
Adult carcass8 ± 10 of 4 4.10Up
Larval CNS4 ± 23 of 4 1.98None
Larval Salivary gland4 ± 10 of 4 2.02None
Larval midgut3 ± 10 of 4 1.58None
Larval tubule4 ± 10 of 4 2.20None
Larval hindgut3 ± 10 of 4 1.54None
Larval fat body7 ± 10 of 4 3.60Up
Larval trachea4 ± 20 of 4 1.94None
Larval carcass3 ± 00 of 4 1.48None
S2 cells (growing)2 ± 00 of 4 0.96None
Whole fly2 ± 00 of 4

Looking for CG7370-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime