Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7384-RA through 18771 annotations produced 1 hits



(CG7384):

Annotation Number : CG7384
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032262
Gbrowse : chr2L:10507856-10510461 (-) // 100.0 //
Probeset : 1624425_at
Accessions : protein= NP_609417;, nucleotide= NM_135573;
FlyMine data for FBgn0032262.
BDGP gene expression has embryonic in situ data for CG7384: 8 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0032262 available for purchase.
VDRC has 1 RNAi stocks for FBgn0032262 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 0.00Down
Head56 ± 44 of 4 0.40Down
Eye24 ± 44 of 4 0.18Down
Thoracicoabdominal ganglion5 ± 10 of 4 0.00Down
Salivary gland6 ± 40 of 4 0.05Down
Crop8 ± 21 of 4 0.10Down
Midgut9 ± 20 of 4 0.10Down
Tubule9 ± 30 of 4 0.10Down
Hindgut8 ± 01 of 4 0.10Down
Heart100 ± 34 of 4 0.76None
Fat body373 ± 184 of 4 2.83Up
Ovary385 ± 44 of 4 2.90Up
Testis10 ± 12 of 4 0.10Down
Male accessory glands242 ± 84 of 4 1.80Up
Virgin spermatheca196 ± 04 of 4 1.49Up
Mated spermatheca206 ± 104 of 4 1.57Up
Adult carcass96 ± 94 of 4 0.70None
Larval CNS5 ± 00 of 4 0.04Down
Larval Salivary gland9 ± 11 of 4 0.07Down
Larval midgut5 ± 00 of 4 0.04Down
Larval tubule5 ± 00 of 4 0.00Down
Larval hindgut4 ± 10 of 4 0.03Down
Larval fat body208 ± 184 of 4 1.60Up
Larval trachea1 ± 10 of 4 0.01Down
Larval carcass3 ± 10 of 4 0.03Down
S2 cells (growing)5 ± 10 of 4 0.04Down
Whole fly132 ± 134 of 4

Looking for CG7384-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime