FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7399-RA through 18771 annotations produced 1 hits

Henna (Hn):

Annotation Number : CG7399
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0001208
Gbrowse : chr3L:7753641-7756256 (+) // 100.0 //
Probeset : 1638325_at
Accessions : protein= NP_001014573; /// NP_523963;, nucleotide= NM_001014573; /// NM_079239;
Pathway : engulfment // inferred from mutant phenotype /// 0009072 // aromatic amino acid family metabolic process // inferred fr
Interpro : 0005811 // lipid particle // inferred from direct assay
FlyMine data for FBgn0001208.
BDGP gene expression has embryonic in situ data for Hn: 17 pix of staining in 2 body parts.
Homophila reports that CG7399 is a close match (7e-120) to human gene TH;TYH (NP_000351), a gene associated with Segawa syndrome, recessive (3).
BioGrid reports that CG7399 interacts with CG8189 CG9135 CG7552 CG7600 CG7807 CG8036 CG8881 .
TRiP has 1 RNAi stocks for FBgn0001208 available for purchase.
VDRC has 2 RNAi stocks for FBgn0001208 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	37 ± 3	4 of 4	0.10	Down
Head	2438 ± 53	4 of 4	6.00	Up
Eye	1792 ± 181	4 of 4	4.40	Up
Thoracicoabdominal ganglion	41 ± 1	4 of 4	0.10	Down
Salivary gland	11 ± 5	0 of 4	0.03	Down
Crop	33 ± 5	4 of 4	0.10	Down
Midgut	2 ± 1	0 of 4	0.00	Down
Tubule	32 ± 5	0 of 4	0.10	Down
Hindgut	105 ± 5	4 of 4	0.30	Down
Heart	1324 ± 91	4 of 4	3.25	Up
Fat body	2985 ± 126	4 of 4	7.33	Up
Ovary	3 ± 1	1 of 4	0.00	Down
Testis	163 ± 8	4 of 4	0.40	Down
Male accessory glands	2 ± 1	0 of 4	0.00	Down
Virgin spermatheca	2908 ± 154	4 of 4	7.14	Up
Mated spermatheca	2022 ± 161	4 of 4	4.97	Up
Adult carcass	2151 ± 77	4 of 4	5.30	Up
Larval CNS	1 ± 0	0 of 4	0.00	Down
Larval Salivary gland	62 ± 1	4 of 4	0.15	Down
Larval midgut	4 ± 0	0 of 4	0.01	Down
Larval tubule	7 ± 2	0 of 4	0.00	Down
Larval hindgut	39 ± 5	4 of 4	0.10	Down
Larval fat body	5662 ± 603	4 of 4	13.90	Up
Larval trachea	72 ± 34	4 of 4	0.18	Down
Larval carcass	518 ± 123	4 of 4	1.27	None
S2 cells (growing)	2 ± 0	0 of 4	0.01	Down
Whole fly	407 ± 40	4 of 4

Looking for CG7399-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720