FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7404-RA through 18771 annotations produced 1 hits

estrogen-related receptor (ERR):

Annotation Number : CG7404
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035849
Gbrowse : chr3L:8176029-8179750 (-) // 100.0 //
Probeset : 1636093_a_at
Accessions : protein= NP_648183; /// NP_729340;, nucleotide= NM_139926; /// NM_168258;
Pathway : DNA-dependent // inferred from electronic annotation /// 0045449 // regulation of transcription // inferred from electr
Interpro : 0005634 // nucleus // inferred from electronic annotation
FlyMine data for FBgn0035849.
BDGP gene expression has embryonic in situ data for ERR: 17 pix of staining in 3 body parts.
Homophila reports that CG7404 is a close match (1e-17) to human gene PPARA;PPAR (NP_005027), a gene associated with {Hyperapobetalipoproteinemia, susceptibility to} (3).
BioGrid reports that CG7404 interacts with CG9218 CG7951 CG8907 .
TRiP has 1 RNAi stocks for FBgn0035849 available for purchase.
VDRC has 1 RNAi stocks for FBgn0035849 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	54 ± 2	4 of 4	1.20	Up
Head	52 ± 5	4 of 4	1.20	None
Eye	54 ± 1	4 of 4	1.20	Up
Thoracicoabdominal ganglion	59 ± 4	4 of 4	1.30	Up
Salivary gland	59 ± 7	4 of 4	1.33	None
Crop	68 ± 3	4 of 4	1.50	Up
Midgut	60 ± 2	4 of 4	1.40	Up
Tubule	363 ± 38	4 of 4	8.10	Up
Hindgut	49 ± 2	4 of 4	1.10	None
Heart	111 ± 9	4 of 4	2.48	Up
Fat body	153 ± 24	4 of 4	3.42	Up
Ovary	71 ± 0	4 of 4	1.60	Up
Testis	6 ± 0	4 of 4	0.10	Down
Male accessory glands	34 ± 3	4 of 4	0.80	None
Virgin spermatheca	162 ± 2	4 of 4	3.61	Up
Mated spermatheca	117 ± 6	4 of 4	2.61	Up
Adult carcass	99 ± 5	4 of 4	2.20	Up
Larval CNS	39 ± 9	4 of 4	0.87	None
Larval Salivary gland	39 ± 4	4 of 4	0.87	None
Larval midgut	54 ± 2	4 of 4	1.21	Up
Larval tubule	46 ± 1	4 of 4	1.00	None
Larval hindgut	33 ± 1	4 of 4	0.76	Down
Larval fat body	43 ± 3	4 of 4	1.00	None
Larval trachea	28 ± 3	4 of 4	0.64	Down
Larval carcass	36 ± 2	4 of 4	0.80	Down
S2 cells (growing)	18 ± 0	4 of 4	0.41	Down
Whole fly	44 ± 2	4 of 4

Looking for CG7404-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720