FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7411-RA through 18771 annotations produced 1 hits

Histamine-gated chloride channel subunit 2 (ort):

Annotation Number : CG7411
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003011
Gbrowse : chr3R:15485469-15489401 (+) // 100.0 //
Probeset : 1625463_at
Accessions : protein= NP_524406;, nucleotide= NM_079682;
Pathway : 0005886 // plasma membrane // inferred from electronic annotation /// 0016020 // membrane // inferred from electronic an
Interpro : 0005216 // ion channel activity // inferred from electronic annotation /// 0005230 // extracellular ligand-gated ion cha
FlyMine data for FBgn0003011.
Homophila reports that CG7411 is a close match (8e-36) to human gene CAE2;ECA2;GABRG2;GEFSP3 (NP_944493), a gene associated with Epilepsy, childhood absence, 2, 607681 (3);Epilepsy, generalized, with febrile seizures plus, type 3, 604233 (3);Febrile convulsions, familial, 8, 611277 (3);Myoclonic epilepsy, severe, of infancy, 607208 (3).
TRiP has 1 RNAi stocks for FBgn0003011 available for purchase.
VDRC has 1 RNAi stocks for FBgn0003011 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	134 ± 2	4 of 4	21.50	Up
Head	45 ± 2	4 of 4	7.20	Up
Eye	44 ± 6	4 of 4	7.15	Up
Thoracicoabdominal ganglion	6 ± 0	2 of 4	1.00	None
Salivary gland	9 ± 3	1 of 4	1.55	None
Crop	5 ± 1	0 of 4	0.90	None
Midgut	7 ± 1	2 of 4	1.20	None
Tubule	4 ± 0	0 of 4	0.70	Down
Hindgut	7 ± 1	4 of 4	1.20	None
Heart	2 ± 1	0 of 4	0.42	None
Fat body	9 ± 6	1 of 4	1.55	None
Ovary	2 ± 0	0 of 4	0.40	None
Testis	5 ± 0	2 of 4	0.90	None
Male accessory glands	10 ± 1	3 of 4	1.70	Up
Virgin spermatheca	2 ± 0	0 of 4	0.37	Down
Mated spermatheca	5 ± 0	2 of 4	0.90	None
Adult carcass	9 ± 3	0 of 4	1.60	None
Larval CNS	4 ± 2	2 of 4	0.71	None
Larval Salivary gland	4 ± 1	1 of 4	0.68	None
Larval midgut	9 ± 2	1 of 4	1.45	None
Larval tubule	6 ± 1	3 of 4	1.10	None
Larval hindgut	4 ± 0	2 of 4	0.74	None
Larval fat body	8 ± 2	0 of 4	1.30	None
Larval trachea	5 ± 0	1 of 4	0.80	None
Larval carcass	3 ± 1	1 of 4	0.52	None
S2 cells (growing)	6 ± 0	3 of 4	0.98	None
Whole fly	6 ± 1	4 of 4

Looking for CG7411-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720