FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7452-RA through 18771 annotations produced 1 hits

syntaxin (Syx17):

Annotation Number : CG7452
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0035540
Gbrowse : chr3L:4403499-4405169 (+) // 100.0 //
Probeset : 1628202_at
Accessions : protein= NP_523926;, nucleotide= NM_079202;
Pathway : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0016020 // membrane // inferred from e
Interpro : 0005484 // SNAP receptor activity // inferred from sequence or structural similarity /// 0005515 // protein binding // i
FlyMine data for FBgn0035540.
TRiP has 1 RNAi stocks for FBgn0035540 available for purchase.
VDRC has 3 RNAi stocks for FBgn0035540 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	246 ± 6	4 of 4	2.20	Up
Head	148 ± 7	4 of 4	1.30	Up
Eye	206 ± 8	4 of 4	1.84	Up
Thoracicoabdominal ganglion	239 ± 5	4 of 4	2.10	Up
Salivary gland	122 ± 3	4 of 4	1.09	None
Crop	148 ± 4	4 of 4	1.30	Up
Midgut	95 ± 4	4 of 4	0.90	None
Tubule	144 ± 2	4 of 4	1.30	Up
Hindgut	117 ± 5	4 of 4	1.00	None
Heart	202 ± 9	4 of 4	1.80	Up
Fat body	117 ± 18	4 of 4	1.05	None
Ovary	180 ± 4	4 of 4	1.60	Up
Testis	104 ± 4	4 of 4	0.90	None
Male accessory glands	127 ± 8	4 of 4	1.10	None
Virgin spermatheca	215 ± 9	4 of 4	1.92	Up
Mated spermatheca	150 ± 11	4 of 4	1.34	Up
Adult carcass	151 ± 9	4 of 4	1.40	Up
Larval CNS	82 ± 7	4 of 4	0.74	Down
Larval Salivary gland	81 ± 5	4 of 4	0.73	Down
Larval midgut	109 ± 16	4 of 4	0.98	None
Larval tubule	118 ± 5	4 of 4	1.10	None
Larval hindgut	85 ± 9	4 of 4	0.76	None
Larval fat body	115 ± 6	4 of 4	1.00	None
Larval trachea	79 ± 17	4 of 4	0.71	Down
Larval carcass	72 ± 13	4 of 4	0.65	None
S2 cells (growing)	81 ± 2	4 of 4	0.73	Down
Whole fly	112 ± 5	4 of 4

Looking for CG7452-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720