FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7486-RC through 18771 annotations produced 1 hits

caspase (Dredd):

Annotation Number : CG7486
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0020381
Gbrowse : chrX:527552-529760 (-) // 100.0 //
Probeset : 1639071_a_at
Accessions : protein= NP_477249; /// NP_477250; /// NP_477251;, nucleotide= NM_057901; /// NM_057902; /// NM_057903;
Pathway : 0005737 // cytoplasm // inferred from direct assay /// 0005737 // cytoplasm // inferred from electronic annotation
Interpro : 0004175 // endopeptidase activity // inferred from direct assay /// 0004197 // cysteine-type endopeptidase activity // i
FlyMine data for FBgn0020381.
BDGP gene expression has embryonic in situ data for Dredd: 4 pix of staining in 1 body parts.
Homophila reports that CG7486 is a close match (1e-15) to human gene ALPS2;CASP10;MCH4 (NP_116756), a gene associated with Autoimmune lymphoproliferative syndrome, type II, 603909 (3);Gastric cancer, somatic, 137215 (3);Non-Hodgkin lymphoma, somatic, 605027 (3).
TRiP has 1 RNAi stocks for FBgn0020381 available for purchase.
VDRC has 2 RNAi stocks for FBgn0020381 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	63 ± 2	4 of 4	0.70	Down
Head	92 ± 3	4 of 4	1.00	None
Eye	109 ± 5	4 of 4	1.20	None
Thoracicoabdominal ganglion	82 ± 2	4 of 4	0.90	None
Salivary gland	235 ± 8	4 of 4	2.59	Up
Crop	202 ± 5	4 of 4	2.20	Up
Midgut	170 ± 7	4 of 4	1.90	Up
Tubule	170 ± 4	4 of 4	1.90	Up
Hindgut	217 ± 8	4 of 4	2.40	Up
Heart	152 ± 9	4 of 4	1.68	Up
Fat body	164 ± 14	4 of 4	1.81	Up
Ovary	91 ± 2	4 of 4	1.00	None
Testis	54 ± 6	4 of 4	0.60	Down
Male accessory glands	251 ± 7	4 of 4	2.80	Up
Virgin spermatheca	210 ± 15	4 of 4	2.32	Up
Mated spermatheca	238 ± 10	4 of 4	2.62	Up
Adult carcass	140 ± 2	4 of 4	1.50	Up
Larval CNS	111 ± 9	4 of 4	1.22	None
Larval Salivary gland	297 ± 18	4 of 4	3.27	Up
Larval midgut	117 ± 9	4 of 4	1.29	None
Larval tubule	189 ± 5	4 of 4	2.10	Up
Larval hindgut	180 ± 3	4 of 4	1.98	Up
Larval fat body	191 ± 9	4 of 4	2.10	Up
Larval trachea	219 ± 5	4 of 4	2.42	Up
Larval carcass	120 ± 4	4 of 4	1.32	Up
S2 cells (growing)	169 ± 2	4 of 4	1.86	Up
Whole fly	90 ± 8	4 of 4

Looking for CG7486-RC. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720