FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7497-RA through 18771 annotations produced 1 hits

chr3L:17626548-17631040 (+) // 100.0 // ():

Annotation Number : CG7497
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : full length
Gbrowse : March 2006 (FlyBase/BDGP 5.3)
Probeset : 1637097_at
Accessions : protein= , nucleotide= NP_648999;
Pathway : 0006468 // protein phosphorylation // non-traceable author statement /// 0007015 // actin filament organization // infer
Interpro : 0016021 // integral to membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred f
FlyMine data for full length.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	40 ± 1	4 of 4	0.80	None
Head	118 ± 4	4 of 4	2.50	Up
Eye	29 ± 3	4 of 4	0.62	Down
Thoracicoabdominal ganglion	44 ± 0	4 of 4	0.90	None
Salivary gland	75 ± 7	4 of 4	1.58	Up
Crop	358 ± 13	4 of 4	7.50	Up
Midgut	170 ± 11	4 of 4	3.60	Up
Tubule	71 ± 6	4 of 4	1.50	Up
Hindgut	402 ± 13	4 of 4	8.50	Up
Heart	94 ± 4	4 of 4	1.99	Up
Fat body	94 ± 7	4 of 4	1.99	Up
Ovary	17 ± 1	4 of 4	0.40	Down
Testis	69 ± 1	4 of 4	1.50	Up
Male accessory glands	54 ± 3	4 of 4	1.10	None
Virgin spermatheca	117 ± 3	4 of 4	2.46	Up
Mated spermatheca	116 ± 5	4 of 4	2.46	Up
Adult carcass	142 ± 9	4 of 4	3.00	Up
Larval CNS	49 ± 6	4 of 4	1.05	None
Larval Salivary gland	8 ± 2	1 of 4	0.18	Down
Larval midgut	124 ± 7	4 of 4	2.61	Up
Larval tubule	38 ± 1	4 of 4	0.80	None
Larval hindgut	87 ± 4	4 of 4	1.83	Up
Larval fat body	14 ± 3	1 of 4	0.30	Down
Larval trachea	821 ± 192	4 of 4	17.26	Up
Larval carcass	107 ± 11	4 of 4	2.26	Up
S2 cells (growing)	6 ± 0	1 of 4	0.15	Down
Whole fly	47 ± 4	4 of 4

Looking for CG7497-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720