FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7510-RA through 18771 annotations produced 1 hits

(CG7510):

Annotation Number : CG7510
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036741
Gbrowse : chr3L:17614925-17623589 (+) // 100.0 //
Probeset : 1626263_at
Accessions : protein= NP_648998;, nucleotide= NM_140741;
Pathway : 0016021 // integral to membrane // inferred from electronic annotation
FlyMine data for FBgn0036741.
BDGP gene expression has embryonic in situ data for CG7510: 13 pix of staining in 6 body parts.
VDRC has 2 RNAi stocks for FBgn0036741 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	168 ± 3	4 of 4	2.20	Up
Head	156 ± 7	4 of 4	2.00	Up
Eye	186 ± 9	4 of 4	2.41	Up
Thoracicoabdominal ganglion	178 ± 5	4 of 4	2.30	Up
Salivary gland	1488 ± 52	4 of 4	19.19	Up
Crop	715 ± 19	4 of 4	9.20	Up
Midgut	81 ± 2	4 of 4	1.00	None
Tubule	159 ± 10	4 of 4	2.10	Up
Hindgut	153 ± 9	4 of 4	2.00	Up
Heart	112 ± 7	4 of 4	1.45	Up
Fat body	130 ± 14	4 of 4	1.69	Up
Ovary	115 ± 6	4 of 4	1.50	Up
Testis	21 ± 3	4 of 4	0.30	Down
Male accessory glands	75 ± 8	4 of 4	1.00	None
Virgin spermatheca	129 ± 5	4 of 4	1.66	Up
Mated spermatheca	95 ± 4	4 of 4	1.23	Up
Adult carcass	106 ± 4	4 of 4	1.40	Up
Larval CNS	97 ± 6	4 of 4	1.26	Up
Larval Salivary gland	40 ± 6	4 of 4	0.52	Down
Larval midgut	140 ± 9	4 of 4	1.81	Up
Larval tubule	113 ± 9	4 of 4	1.50	Up
Larval hindgut	107 ± 5	4 of 4	1.38	Up
Larval fat body	43 ± 4	4 of 4	0.60	Down
Larval trachea	51 ± 11	4 of 4	0.67	Down
Larval carcass	74 ± 12	4 of 4	0.97	None
S2 cells (growing)	59 ± 3	4 of 4	0.76	Down
Whole fly	77 ± 5	4 of 4

Looking for CG7510-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720