FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7533-RC through 18771 annotations produced 1 hits

charybdis (chrb):

Annotation Number : CG7533
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036165
Gbrowse : chr3L:11480659-11490064 (+) // 100.0 //
Probeset : 1627511_at
Accessions : protein= NP_648470;, nucleotide= NM_140213;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005737 // cytoplasm // inferred from sequence or struct
FlyMine data for FBgn0036165.
BDGP gene expression has embryonic in situ data for charybde: 55 pix of staining in 32 body parts.
BioGrid reports that CG7533 interacts with CG8368 .
VDRC has 1 RNAi stocks for FBgn0036165 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	196 ± 14	4 of 4	5.10	Up
Head	83 ± 3	4 of 4	2.20	Up
Eye	485 ± 19	4 of 4	12.61	Up
Thoracicoabdominal ganglion	280 ± 29	4 of 4	7.30	Up
Salivary gland	52 ± 1	4 of 4	1.37	Up
Crop	158 ± 7	4 of 4	4.10	Up
Midgut	37 ± 4	4 of 4	1.00	None
Tubule	18 ± 3	3 of 4	0.50	Down
Hindgut	110 ± 5	4 of 4	2.90	Up
Heart	511 ± 38	4 of 4	13.30	Up
Fat body	40 ± 3	4 of 4	1.04	None
Ovary	58 ± 4	4 of 4	1.50	Up
Testis	16 ± 2	4 of 4	0.40	Down
Male accessory glands	47 ± 0	4 of 4	1.20	None
Virgin spermatheca	68 ± 2	4 of 4	1.78	Up
Mated spermatheca	108 ± 13	4 of 4	2.82	Up
Adult carcass	80 ± 9	4 of 4	2.10	Up
Larval CNS	144 ± 20	4 of 4	3.77	Up
Larval Salivary gland	21 ± 2	4 of 4	0.56	Down
Larval midgut	28 ± 1	4 of 4	0.73	Down
Larval tubule	43 ± 4	4 of 4	1.10	None
Larval hindgut	88 ± 4	4 of 4	2.29	Up
Larval fat body	13 ± 0	4 of 4	0.30	Down
Larval trachea	89 ± 33	4 of 4	2.32	None
Larval carcass	42 ± 3	4 of 4	1.10	None
S2 cells (growing)	16 ± 1	4 of 4	0.42	Down
Whole fly	38 ± 2	4 of 4

Looking for CG7533-RC. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720