FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7562-RA through 18771 annotations produced 1 hits

TBP-related factor (Trf):

Annotation Number : CG7562
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0010287
Gbrowse : chr2L:8072896-8073949 (+) // 100.0 //
Probeset : 1624550_at
Accessions : protein= NP_476939;, nucleotide= NM_057591;
Pathway : DNA-dependent // inferred from electronic annotation /// 0006357 // regulation of transcription from RNA polymerase II
Interpro : 0005634 // nucleus // inferred from electronic annotation /// 0005667 // transcription factor complex // inferred from p
FlyMine data for FBgn0010287.
BDGP gene expression has embryonic in situ data for Trf: 10 pix of staining in 1 body parts.
Homophila reports that CG7562 is a close match (6e-62) to human gene SCA17;TBP (NP_003185), a gene associated with Huntington disease-like-4, 607136 (3);Parkinson disease, 168600 (3);Spinocerebellar ataxia 17, 607136 (3).
BioGrid reports that CG7562 interacts with CG5193 CG31256 .
VDRC has 1 RNAi stocks for FBgn0010287 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	50 ± 2	4 of 4	0.90	None
Head	27 ± 1	4 of 4	0.50	Down
Eye	24 ± 1	4 of 4	0.42	Down
Thoracicoabdominal ganglion	43 ± 1	4 of 4	0.70	Down
Salivary gland	24 ± 2	4 of 4	0.41	Down
Crop	23 ± 1	4 of 4	0.40	Down
Midgut	30 ± 2	4 of 4	0.50	Down
Tubule	28 ± 2	4 of 4	0.50	Down
Hindgut	20 ± 1	4 of 4	0.40	Down
Heart	15 ± 1	4 of 4	0.26	Down
Fat body	23 ± 4	4 of 4	0.39	Down
Ovary	92 ± 2	4 of 4	1.60	Up
Testis	108 ± 4	4 of 4	1.80	Up
Male accessory glands	49 ± 4	4 of 4	0.80	None
Virgin spermatheca	16 ± 1	4 of 4	0.27	Down
Mated spermatheca	17 ± 1	4 of 4	0.29	Down
Adult carcass	13 ± 1	1 of 4	0.20	Down
Larval CNS	59 ± 2	4 of 4	1.01	None
Larval Salivary gland	34 ± 4	4 of 4	0.59	Down
Larval midgut	15 ± 1	2 of 4	0.27	Down
Larval tubule	16 ± 2	3 of 4	0.30	Down
Larval hindgut	20 ± 2	4 of 4	0.35	Down
Larval fat body	41 ± 7	4 of 4	0.70	None
Larval trachea	42 ± 11	4 of 4	0.71	None
Larval carcass	23 ± 3	4 of 4	0.40	Down
S2 cells (growing)	49 ± 0	4 of 4	0.84	Down
Whole fly	59 ± 3	4 of 4

Looking for CG7562-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720