FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7563-RB through 18771 annotations produced 2 hits

Calpain A (CalpA):

Annotation Number : CG7563
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0012051
Gbrowse : chr2R:15312577-15316555 (+) // 100.0 //
Probeset : 1633524_a_at
Accessions : protein= NP_001097378; /// NP_477047; /// NP_477048;, nucleotide= NM_001103908; /// NM_057699; /// NM_057700;
Pathway : engulfment // inferred from mutant phenotype /// 0009953 // dorsal/ventral pattern formation // inferred from direct as
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct ass
FlyMine data for FBgn0012051.
BDGP gene expression has embryonic in situ data for CalpA: 30 pix of staining in 17 body parts.
Homophila reports that CG7563 is a close match (7e-16) to human gene CANP3;CAPN3 (NP_775111), a gene associated with Muscular dystrophy, limb-girdle, type 2A, 253600 (3).
TRiP has 1 RNAi stocks for FBgn0012051 available for purchase.
VDRC has 3 RNAi stocks for FBgn0012051 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	206 ± 3	4 of 4	2.90	Up
Head	187 ± 15	4 of 4	2.60	Up
Eye	132 ± 5	4 of 4	1.85	Up
Thoracicoabdominal ganglion	362 ± 19	4 of 4	5.10	Up
Salivary gland	274 ± 13	4 of 4	3.83	Up
Crop	220 ± 13	4 of 4	3.10	Up
Midgut	74 ± 2	4 of 4	1.00	None
Tubule	79 ± 3	4 of 4	1.10	Up
Hindgut	174 ± 5	4 of 4	2.40	Up
Heart	67 ± 5	4 of 4	0.94	None
Fat body	68 ± 12	4 of 4	0.96	None
Ovary	40 ± 1	4 of 4	0.60	Down
Testis	49 ± 4	4 of 4	0.70	Down
Male accessory glands	33 ± 2	4 of 4	0.50	Down
Virgin spermatheca	35 ± 1	4 of 4	0.50	Down
Mated spermatheca	41 ± 1	4 of 4	0.58	Down
Adult carcass	155 ± 9	4 of 4	2.20	Up
Larval CNS	108 ± 13	4 of 4	1.52	Up
Larval Salivary gland	16 ± 4	4 of 4	0.22	Down
Larval midgut	119 ± 2	4 of 4	1.67	Up
Larval tubule	90 ± 6	4 of 4	1.30	None
Larval hindgut	165 ± 5	4 of 4	2.31	Up
Larval fat body	70 ± 3	4 of 4	1.00	None
Larval trachea	228 ± 50	4 of 4	3.19	Up
Larval carcass	273 ± 12	4 of 4	3.82	Up
S2 cells (growing)	350 ± 9	4 of 4	4.90	Up
Whole fly	71 ± 4	4 of 4

Calpain A (CalpA):

Annotation Number : CG7563
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0012051
Gbrowse : chr2R:15312577-15318068 (+) // 100.0 //
Probeset : 1628628_at
Accessions : protein= NP_001097378; /// NP_477047; /// NP_477048;, nucleotide= NM_001103908; /// NM_057699; /// NM_057700;
Pathway : engulfment // inferred from mutant phenotype /// 0009953 // dorsal/ventral pattern formation // inferred from direct as
Interpro : 0005622 // intracellular // inferred from electronic annotation /// 0005622 // intracellular // inferred from direct ass
FlyMine data for FBgn0012051.
BDGP gene expression has embryonic in situ data for CalpA: 30 pix of staining in 17 body parts.
Homophila reports that CG7563 is a close match (7e-16) to human gene CANP3;CAPN3 (NP_775111), a gene associated with Muscular dystrophy, limb-girdle, type 2A, 253600 (3).
TRiP has 1 RNAi stocks for FBgn0012051 available for purchase.
VDRC has 3 RNAi stocks for FBgn0012051 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	69 ± 5	4 of 4	2.90	Up
Head	45 ± 3	4 of 4	1.90	Up
Eye	35 ± 6	4 of 4	1.48	None
Thoracicoabdominal ganglion	106 ± 4	4 of 4	4.40	Up
Salivary gland	77 ± 6	4 of 4	3.21	Up
Crop	85 ± 4	4 of 4	3.50	Up
Midgut	17 ± 1	4 of 4	0.70	Down
Tubule	23 ± 0	4 of 4	0.90	Down
Hindgut	42 ± 2	4 of 4	1.70	Up
Heart	42 ± 4	4 of 4	1.76	Up
Fat body	46 ± 7	4 of 4	1.91	Up
Ovary	17 ± 1	4 of 4	0.70	Down
Testis	17 ± 2	4 of 4	0.70	Down
Male accessory glands	18 ± 3	4 of 4	0.80	None
Virgin spermatheca	46 ± 3	4 of 4	1.92	Up
Mated spermatheca	62 ± 3	4 of 4	2.60	Up
Adult carcass	48 ± 5	4 of 4	2.00	Up
Larval CNS	72 ± 5	4 of 4	3.01	Up
Larval Salivary gland	9 ± 3	1 of 4	0.37	Down
Larval midgut	18 ± 0	4 of 4	0.77	Down
Larval tubule	22 ± 0	4 of 4	0.90	None
Larval hindgut	56 ± 5	4 of 4	2.34	Up
Larval fat body	29 ± 2	4 of 4	1.20	None
Larval trachea	125 ± 19	4 of 4	5.19	Up
Larval carcass	139 ± 6	4 of 4	5.77	Up
S2 cells (growing)	146 ± 3	4 of 4	6.05	Up
Whole fly	24 ± 1	4 of 4

Looking for CG7563-RB. 2 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720