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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7588-RA through 18771 annotations produced 1 hits



Eig71Ej (Eig71Ej):

Annotation Number : CG7588
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0014850
Gbrowse : chr3L:15653648-15654115 (-) // 100.0 //
Probeset : 1630138_at
Accessions : protein= NP_648796;, nucleotide= NM_140539;
FlyMine data for FBgn0014850.
VDRC has 3 RNAi stocks for FBgn0014850 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain0 ± 00 of 4 0.40None
Head2 ± 00 of 4 1.60None
Eye2 ± 10 of 4 1.74None
Thoracicoabdominal ganglion1 ± 00 of 4 0.70None
Salivary gland8 ± 40 of 4 5.38None
Crop1 ± 00 of 4 1.20None
Midgut2 ± 10 of 4 1.50None
Tubule0 ± 00 of 4 0.50Down
Hindgut1 ± 00 of 4 0.90None
Heart3 ± 10 of 4 2.20None
Fat body3 ± 50 of 4 2.30None
Ovary1 ± 00 of 4 0.70None
Testis4 ± 00 of 4 2.70None
Male accessory glands0 ± 00 of 4 0.60None
Virgin spermatheca2 ± 10 of 4 1.48None
Mated spermatheca4 ± 10 of 4 2.77None
Adult carcass1 ± 00 of 4 0.60None
Larval CNS0 ± 00 of 4 0.59None
Larval Salivary gland1 ± 10 of 4 1.15None
Larval midgut2 ± 00 of 4 1.44None
Larval tubule0 ± 00 of 4 0.60None
Larval hindgut2 ± 00 of 4 1.23None
Larval fat body1 ± 00 of 4 1.10None
Larval trachea3 ± 20 of 4 2.17None
Larval carcass2 ± 10 of 4 1.35None
S2 cells (growing)2 ± 00 of 4 1.30None
Whole fly1 ± 10 of 4

Looking for CG7588-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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