FlyAtlas: the Drosophila gene expression atlas

Biotechnology & Biological Sciences Research Council

Home & Search

Batch/table Search

Tissues Search

BLASTP Search

About & FAQ

Top 50

Original data

Interesting meta-analysis

Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7632-RA through 18771 annotations produced 1 hits

(CG7632):

Annotation Number : CG7632
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037071
Gbrowse : chr3L:21297816-21299298 (+) // 100.0 //
Probeset : 1627004_at
Accessions : protein= NP_649302;, nucleotide= NM_141045;
FlyMine data for FBgn0037071.
BDGP gene expression has embryonic in situ data for CG7632: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0037071 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	105 ± 4	4 of 4	0.90	None
Head	120 ± 13	4 of 4	1.00	None
Eye	119 ± 5	4 of 4	0.98	None
Thoracicoabdominal ganglion	113 ± 2	4 of 4	0.90	None
Salivary gland	79 ± 6	4 of 4	0.65	Down
Crop	242 ± 8	4 of 4	2.00	Up
Midgut	99 ± 7	4 of 4	0.80	None
Tubule	123 ± 12	4 of 4	1.00	None
Hindgut	159 ± 8	4 of 4	1.30	Up
Heart	145 ± 3	4 of 4	1.19	Up
Fat body	123 ± 12	4 of 4	1.01	None
Ovary	205 ± 4	4 of 4	1.70	Up
Testis	38 ± 2	4 of 4	0.30	Down
Male accessory glands	91 ± 6	4 of 4	0.70	Down
Virgin spermatheca	66 ± 4	4 of 4	0.54	Down
Mated spermatheca	83 ± 6	4 of 4	0.68	Down
Adult carcass	165 ± 13	4 of 4	1.40	Up
Larval CNS	65 ± 2	4 of 4	0.53	Down
Larval Salivary gland	67 ± 2	4 of 4	0.55	Down
Larval midgut	67 ± 4	4 of 4	0.55	Down
Larval tubule	61 ± 1	4 of 4	0.50	Down
Larval hindgut	79 ± 2	4 of 4	0.65	Down
Larval fat body	35 ± 6	4 of 4	0.30	Down
Larval trachea	91 ± 4	4 of 4	0.75	Down
Larval carcass	80 ± 2	4 of 4	0.66	Down
S2 cells (growing)	232 ± 10	4 of 4	1.90	Up
Whole fly	122 ± 6	4 of 4

Looking for CG7632-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720