Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7654-RA through 18771 annotations produced 1 hits



Translocase of outer membrane 20 (Tom20):

Annotation Number : CG7654
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036928
Gbrowse : chr3L:19994188-19995411 (+) // 100.0 //
Probeset : 1635011_at
Accessions : protein= NP_649169;, nucleotide= NM_140912;
Pathway : 0005739 // mitochondrion // inferred from direct assay /// 0005742 // mitochondrial outer membrane translocase complex /
Interpro : 0015450 // P-P-bond-hydrolysis-driven protein transmembrane transporter activity // inferred from sequence or structural
FlyMine data for FBgn0036928.
BDGP gene expression has embryonic in situ data for CG7654: 15 pix of staining in 20 body parts.
VDRC has 3 RNAi stocks for FBgn0036928 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain947 ± 164 of 4 1.10None
Head704 ± 144 of 4 0.80Down
Eye1115 ± 324 of 4 1.30Up
Thoracicoabdominal ganglion994 ± 294 of 4 1.20Up
Salivary gland586 ± 264 of 4 0.68Down
Crop712 ± 164 of 4 0.80Down
Midgut600 ± 124 of 4 0.70Down
Tubule336 ± 114 of 4 0.40Down
Hindgut670 ± 204 of 4 0.80Down
Heart787 ± 304 of 4 0.92None
Fat body586 ± 944 of 4 0.68Down
Ovary1217 ± 264 of 4 1.40Up
Testis1001 ± 254 of 4 1.20Up
Male accessory glands530 ± 154 of 4 0.60Down
Virgin spermatheca344 ± 174 of 4 0.40Down
Mated spermatheca417 ± 164 of 4 0.49Down
Adult carcass575 ± 104 of 4 0.70Down
Larval CNS840 ± 354 of 4 0.98None
Larval Salivary gland789 ± 284 of 4 0.92None
Larval midgut387 ± 334 of 4 0.45Down
Larval tubule497 ± 124 of 4 0.60Down
Larval hindgut723 ± 334 of 4 0.84Down
Larval fat body365 ± 574 of 4 0.40Down
Larval trachea1266 ± 894 of 4 1.48Up
Larval carcass589 ± 894 of 4 0.69None
S2 cells (growing)952 ± 124 of 4 1.11None
Whole fly858 ± 374 of 4

Looking for CG7654-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime