FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7725-RB through 18771 annotations produced 1 hits

rogdi (rogdi):

Annotation Number : CG7725
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036697
Gbrowse : chr3L:17042615-17048556 (+) // 100.0 //
Probeset : 1624649_a_at
Accessions : protein= NP_648956; /// NP_730244;, nucleotide= NM_140699; /// NM_168717;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0036697.
BDGP gene expression has embryonic in situ data for CG7725: 11 pix of staining in 3 body parts.
BioGrid reports that CG7725 interacts with CG8472 .
VDRC has 3 RNAi stocks for FBgn0036697 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	380 ± 9	4 of 4	1.70	Up
Head	343 ± 20	4 of 4	1.60	Up
Eye	559 ± 15	4 of 4	2.53	Up
Thoracicoabdominal ganglion	569 ± 11	4 of 4	2.60	Up
Salivary gland	93 ± 6	4 of 4	0.42	Down
Crop	109 ± 2	4 of 4	0.50	Down
Midgut	429 ± 22	4 of 4	1.90	Up
Tubule	135 ± 12	4 of 4	0.60	Down
Hindgut	126 ± 6	4 of 4	0.60	Down
Heart	403 ± 13	4 of 4	1.83	Up
Fat body	521 ± 58	4 of 4	2.36	Up
Ovary	349 ± 3	4 of 4	1.60	Up
Testis	27 ± 0	4 of 4	0.10	Down
Male accessory glands	73 ± 3	4 of 4	0.30	Down
Virgin spermatheca	1269 ± 56	4 of 4	5.75	Up
Mated spermatheca	884 ± 58	4 of 4	4.01	Up
Adult carcass	298 ± 13	4 of 4	1.40	Up
Larval CNS	328 ± 21	4 of 4	1.49	Up
Larval Salivary gland	1182 ± 99	4 of 4	5.36	Up
Larval midgut	683 ± 62	4 of 4	3.10	Up
Larval tubule	151 ± 7	4 of 4	0.70	Down
Larval hindgut	567 ± 24	4 of 4	2.57	Up
Larval fat body	258 ± 24	4 of 4	1.20	None
Larval trachea	181 ± 23	4 of 4	0.82	Down
Larval carcass	139 ± 11	4 of 4	0.63	Down
S2 cells (growing)	371 ± 10	4 of 4	1.68	Up
Whole fly	220 ± 7	4 of 4

Looking for CG7725-RB. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720