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FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7737-RA through 18771 annotations produced 1 hits



(CG7737):

Annotation Number : CG7737
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033584
Gbrowse : chr2R:7110375-7114251 (+) // 100.0 //
Probeset : 1637758_at
Accessions : protein= NP_610641;, nucleotide= NM_136797;
FlyMine data for FBgn0033584.
BDGP gene expression has embryonic in situ data for CG7737: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0033584 available for purchase.
VDRC has 2 RNAi stocks for FBgn0033584 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain199 ± 74 of 4 1.70Up
Head80 ± 24 of 4 0.70Down
Eye23 ± 14 of 4 0.20Down
Thoracicoabdominal ganglion272 ± 74 of 4 2.40Up
Salivary gland10 ± 40 of 4 0.09Down
Crop34 ± 24 of 4 0.30Down
Midgut103 ± 14 of 4 0.90Down
Tubule11 ± 22 of 4 0.10Down
Hindgut22 ± 14 of 4 0.20Down
Heart13 ± 14 of 4 0.11Down
Fat body25 ± 74 of 4 0.22Down
Ovary240 ± 44 of 4 2.10Up
Testis50 ± 14 of 4 0.40Down
Male accessory glands14 ± 23 of 4 0.10Down
Virgin spermatheca18 ± 14 of 4 0.16Down
Mated spermatheca31 ± 14 of 4 0.27Down
Adult carcass43 ± 24 of 4 0.40Down
Larval CNS188 ± 134 of 4 1.63Up
Larval Salivary gland19 ± 14 of 4 0.17Down
Larval midgut113 ± 234 of 4 0.98None
Larval tubule17 ± 14 of 4 0.20Down
Larval hindgut45 ± 64 of 4 0.39Down
Larval fat body61 ± 24 of 4 0.50Down
Larval trachea12 ± 64 of 4 0.11Down
Larval carcass83 ± 184 of 4 0.72None
S2 cells (growing)152 ± 54 of 4 1.32Up
Whole fly115 ± 34 of 4

Looking for CG7737-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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