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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7760-RA through 18771 annotations produced 1 hits



cousin of atonal (cato):

Annotation Number : CG7760
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024249
Gbrowse : chr2R:12165293-12165863 (-) // 100.0 //
Probeset : 1623462_at
Accessions : protein= NP_477344;, nucleotide= NM_057996;
Pathway : DNA-dependent // inferred from sequence or structural similarity /// 0007423 // sensory organ development // inferred f
Interpro : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
FlyMine data for FBgn0024249.
Homophila reports that CG7760 is a close match (3e-12) to human gene NEUROD1;NIDDM (NP_002491), a gene associated with {Diabetes mellitus, noninsulin-dependent}, 125853 (3).
TRiP has 1 RNAi stocks for FBgn0024249 available for purchase.
VDRC has 3 RNAi stocks for FBgn0024249 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain3 ± 10 of 4 1.80None
Head2 ± 00 of 4 1.30None
Eye1 ± 00 of 4 0.86None
Thoracicoabdominal ganglion6 ± 00 of 4 3.40Up
Salivary gland8 ± 30 of 4 4.99None
Crop5 ± 20 of 4 3.20None
Midgut2 ± 10 of 4 1.60None
Tubule6 ± 00 of 4 3.60Up
Hindgut3 ± 10 of 4 2.00None
Heart4 ± 10 of 4 2.69None
Fat body1 ± 00 of 4 0.94None
Ovary3 ± 10 of 4 1.80None
Testis2 ± 00 of 4 1.10None
Male accessory glands7 ± 30 of 4 4.30None
Virgin spermatheca2 ± 00 of 4 1.44None
Mated spermatheca1 ± 00 of 4 0.86None
Adult carcass5 ± 10 of 4 3.10None
Larval CNS2 ± 10 of 4 1.27None
Larval Salivary gland9 ± 00 of 4 5.27Up
Larval midgut1 ± 00 of 4 0.79None
Larval tubule3 ± 10 of 4 2.00None
Larval hindgut2 ± 00 of 4 1.25None
Larval fat body2 ± 00 of 4 1.40None
Larval trachea4 ± 20 of 4 2.54None
Larval carcass3 ± 10 of 4 1.97None
S2 cells (growing)3 ± 10 of 4 1.79None
Whole fly1 ± 00 of 4

Looking for CG7760-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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