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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7773-RA through 18771 annotations produced 1 hits



fidipidine (fidipidine):

Annotation Number : CG7773
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0025519
Gbrowse : chr2R:12148159-12152121 (-) // 100.0 //
Probeset : 1640164_at
Accessions : protein= NP_523760;, nucleotide= NM_079036;
FlyMine data for FBgn0025519.
VDRC has 1 RNAi stocks for FBgn0025519 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 02 of 4 2.20Up
Head4 ± 10 of 4 1.70None
Eye1 ± 10 of 4 0.67None
Thoracicoabdominal ganglion5 ± 10 of 4 1.90None
Salivary gland1 ± 10 of 4 0.71None
Crop2 ± 10 of 4 0.90None
Midgut2 ± 10 of 4 1.00None
Tubule3 ± 00 of 4 1.10None
Hindgut1 ± 00 of 4 0.50None
Heart4 ± 01 of 4 1.52None
Fat body2 ± 20 of 4 0.92None
Ovary1 ± 00 of 4 0.50None
Testis2 ± 10 of 4 0.80None
Male accessory glands7 ± 00 of 4 2.90Up
Virgin spermatheca1 ± 00 of 4 0.48None
Mated spermatheca4 ± 10 of 4 1.75None
Adult carcass2 ± 10 of 4 1.00None
Larval CNS1 ± 10 of 4 0.67None
Larval Salivary gland1 ± 10 of 4 0.50None
Larval midgut1 ± 00 of 4 0.52None
Larval tubule2 ± 00 of 4 1.10None
Larval hindgut1 ± 00 of 4 0.67None
Larval fat body4 ± 20 of 4 1.50None
Larval trachea2 ± 21 of 4 1.02None
Larval carcass2 ± 00 of 4 0.81None
S2 cells (growing)0 ± 00 of 4 0.30None
Whole fly2 ± 00 of 4

Looking for CG7773-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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