FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7840-RA through 18771 annotations produced 1 hits

(CG7840):

Annotation Number : CG7840
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0032014
Gbrowse : chr2L:8305589-8306743 (+) // 100.0 //
Probeset : 1623449_at
Accessions : protein= NP_609203;, nucleotide= NM_135359;
Pathway : 0005737 // cytoplasm // inferred from electronic annotation /// 0005783 // endoplasmic reticulum // inferred from electr
Interpro : "0003865 // 3-oxo-5-alpha-steroid 4-dehydrogenase activity // inferred from sequence or structural similarity /// 000386
FlyMine data for FBgn0032014.
BDGP gene expression has embryonic in situ data for CG7840: 4 pix of staining in 1 body parts.
TRiP has 3 RNAi stocks for FBgn0032014 available for purchase.
VDRC has 4 RNAi stocks for FBgn0032014 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	55 ± 2	4 of 4	0.10	Down
Head	77 ± 4	4 of 4	0.10	Down
Eye	142 ± 7	4 of 4	0.25	Down
Thoracicoabdominal ganglion	53 ± 3	4 of 4	0.10	Down
Salivary gland	157 ± 2	4 of 4	0.28	Down
Crop	86 ± 5	4 of 4	0.20	Down
Midgut	181 ± 7	4 of 4	0.30	Down
Tubule	139 ± 14	4 of 4	0.20	Down
Hindgut	69 ± 4	4 of 4	0.10	Down
Heart	160 ± 8	4 of 4	0.28	Down
Fat body	129 ± 7	4 of 4	0.23	Down
Ovary	1067 ± 19	4 of 4	1.90	Up
Testis	111 ± 5	4 of 4	0.20	Down
Male accessory glands	114 ± 12	4 of 4	0.20	Down
Virgin spermatheca	142 ± 7	4 of 4	0.25	Down
Mated spermatheca	136 ± 7	4 of 4	0.24	Down
Adult carcass	100 ± 11	4 of 4	0.20	Down
Larval CNS	105 ± 14	4 of 4	0.19	Down
Larval Salivary gland	190 ± 16	4 of 4	0.34	Down
Larval midgut	156 ± 8	4 of 4	0.28	Down
Larval tubule	146 ± 12	4 of 4	0.30	Down
Larval hindgut	75 ± 3	4 of 4	0.13	Down
Larval fat body	133 ± 5	4 of 4	0.20	Down
Larval trachea	92 ± 5	4 of 4	0.16	Down
Larval carcass	88 ± 6	4 of 4	0.16	Down
S2 cells (growing)	351 ± 8	4 of 4	0.62	Down
Whole fly	565 ± 30	4 of 4

Looking for CG7840-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720