FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7878-RA through 18771 annotations produced 1 hits

(CG7878):

Annotation Number : CG7878
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037549
Gbrowse : chr3R:3948420-3950997 (+) // 100.0 //
Probeset : 1639665_at
Accessions : protein= NP_649767;, nucleotide= NM_141510;
Interpro : 0000166 // nucleotide binding // inferred from electronic annotation /// 0003676 // nucleic acid binding // inferred fro
FlyMine data for FBgn0037549.
BDGP gene expression has embryonic in situ data for CG7878: 13 pix of staining in 4 body parts.
TRiP has 1 RNAi stocks for FBgn0037549 available for purchase.
VDRC has 1 RNAi stocks for FBgn0037549 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	117 ± 5	4 of 4	0.90	None
Head	114 ± 10	4 of 4	0.80	None
Eye	82 ± 4	4 of 4	0.61	Down
Thoracicoabdominal ganglion	128 ± 6	4 of 4	0.90	None
Salivary gland	136 ± 7	4 of 4	1.01	None
Crop	102 ± 3	4 of 4	0.80	Down
Midgut	117 ± 5	4 of 4	0.90	None
Tubule	185 ± 4	4 of 4	1.40	Up
Hindgut	132 ± 4	4 of 4	1.00	None
Heart	84 ± 5	4 of 4	0.62	Down
Fat body	122 ± 19	4 of 4	0.91	None
Ovary	265 ± 4	4 of 4	2.00	Up
Testis	164 ± 5	4 of 4	1.20	Up
Male accessory glands	237 ± 5	4 of 4	1.80	Up
Virgin spermatheca	125 ± 13	4 of 4	0.93	None
Mated spermatheca	154 ± 5	4 of 4	1.13	None
Adult carcass	97 ± 6	4 of 4	0.70	Down
Larval CNS	222 ± 22	4 of 4	1.64	Up
Larval Salivary gland	180 ± 14	4 of 4	1.33	Up
Larval midgut	80 ± 3	4 of 4	0.59	Down
Larval tubule	173 ± 12	4 of 4	1.30	Up
Larval hindgut	120 ± 10	4 of 4	0.89	None
Larval fat body	99 ± 3	4 of 4	0.70	Down
Larval trachea	136 ± 28	4 of 4	1.00	None
Larval carcass	130 ± 10	4 of 4	0.96	None
S2 cells (growing)	532 ± 18	4 of 4	3.92	Up
Whole fly	135 ± 6	4 of 4

Looking for CG7878-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720