FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7893-RB through 18771 annotations produced 2 hits

vav (vav):

Annotation Number : CG7893
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040068
Gbrowse : chrX:19155863-19166124 (+) // 100.0 //
Probeset : 1636614_a_at
Accessions : protein= NP_001097030; /// NP_573372; /// NP_728235;, nucleotide= NM_001103560; /// NM_133144; /// NM_167642;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 //
FlyMine data for FBgn0040068.
BDGP gene expression has embryonic in situ data for vav: 28 pix of staining in 20 body parts.
Homophila reports that CG7893 is a close match (5e-13) to human gene ARHGEF10;KIAA0294 (NP_055444), a gene associated with Slowed nerve conduction velocity, AD, 608236 (3).
TRiP has 1 RNAi stocks for FBgn0040068 available for purchase.
VDRC has 3 RNAi stocks for FBgn0040068 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	59 ± 0	4 of 4	1.10	None
Head	50 ± 5	4 of 4	0.90	None
Eye	40 ± 1	4 of 4	0.72	None
Thoracicoabdominal ganglion	40 ± 1	4 of 4	0.70	None
Salivary gland	82 ± 3	4 of 4	1.46	Up
Crop	49 ± 1	4 of 4	0.90	None
Midgut	54 ± 3	4 of 4	1.00	None
Tubule	40 ± 3	4 of 4	0.70	Down
Hindgut	60 ± 5	4 of 4	1.10	None
Heart	38 ± 2	4 of 4	0.69	None
Fat body	62 ± 9	4 of 4	1.12	None
Ovary	128 ± 6	4 of 4	2.30	Up
Testis	27 ± 2	4 of 4	0.50	Down
Male accessory glands	74 ± 4	4 of 4	1.30	None
Virgin spermatheca	32 ± 2	4 of 4	0.58	Down
Mated spermatheca	39 ± 3	4 of 4	0.70	None
Adult carcass	51 ± 6	4 of 4	0.90	None
Larval CNS	40 ± 4	4 of 4	0.72	None
Larval Salivary gland	59 ± 7	4 of 4	1.06	None
Larval midgut	45 ± 1	4 of 4	0.81	None
Larval tubule	34 ± 2	4 of 4	0.60	Down
Larval hindgut	48 ± 4	4 of 4	0.87	None
Larval fat body	29 ± 4	4 of 4	0.50	Down
Larval trachea	41 ± 3	4 of 4	0.74	None
Larval carcass	45 ± 0	4 of 4	0.80	None
S2 cells (growing)	89 ± 6	4 of 4	1.60	Up
Whole fly	56 ± 6	4 of 4

vav (vav):

Annotation Number : CG7893
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0040068
Gbrowse : chrX:19155863-19167312 (+) // 100.0 //
Probeset : 1635592_at
Accessions : protein= NP_001097030; /// NP_573372; /// NP_728235;, nucleotide= NM_001103560; /// NM_133144; /// NM_167642;
Pathway : 0005622 // intracellular // inferred from electronic annotation
Interpro : 0005085 // guanyl-nucleotide exchange factor activity // inferred from sequence or structural similarity /// 0005085 //
FlyMine data for FBgn0040068.
BDGP gene expression has embryonic in situ data for vav: 28 pix of staining in 20 body parts.
Homophila reports that CG7893 is a close match (5e-13) to human gene ARHGEF10;KIAA0294 (NP_055444), a gene associated with Slowed nerve conduction velocity, AD, 608236 (3).
TRiP has 1 RNAi stocks for FBgn0040068 available for purchase.
VDRC has 3 RNAi stocks for FBgn0040068 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	187 ± 5	4 of 4	5.00	Up
Head	73 ± 7	4 of 4	2.00	Up
Eye	72 ± 4	4 of 4	1.95	Up
Thoracicoabdominal ganglion	225 ± 15	4 of 4	6.10	Up
Salivary gland	69 ± 6	4 of 4	1.87	Up
Crop	63 ± 2	4 of 4	1.70	Up
Midgut	49 ± 3	4 of 4	1.30	Up
Tubule	46 ± 2	4 of 4	1.20	Up
Hindgut	81 ± 2	4 of 4	2.20	Up
Heart	57 ± 4	4 of 4	1.56	Up
Fat body	50 ± 8	4 of 4	1.35	Up
Ovary	29 ± 1	4 of 4	0.80	Down
Testis	13 ± 1	3 of 4	0.40	Down
Male accessory glands	155 ± 7	4 of 4	4.20	Up
Virgin spermatheca	60 ± 3	4 of 4	1.62	Up
Mated spermatheca	67 ± 8	4 of 4	1.80	Up
Adult carcass	47 ± 3	4 of 4	1.30	Up
Larval CNS	199 ± 11	4 of 4	5.37	Up
Larval Salivary gland	76 ± 6	4 of 4	2.05	Up
Larval midgut	69 ± 5	4 of 4	1.85	Up
Larval tubule	59 ± 5	4 of 4	1.60	Up
Larval hindgut	85 ± 3	4 of 4	2.29	Up
Larval fat body	44 ± 4	4 of 4	1.20	None
Larval trachea	55 ± 5	4 of 4	1.48	Up
Larval carcass	94 ± 6	4 of 4	2.55	Up
S2 cells (growing)	109 ± 5	4 of 4	2.93	Up
Whole fly	37 ± 1	4 of 4

Looking for CG7893-RB. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720