Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG7917-RA through 18771 annotations produced 1 hits



nucleoplasmin-1 (Nlp):

Annotation Number : CG7917
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0016685
Gbrowse : chr3R:25830506-25836074 (+) // 100.0 //
Probeset : 1635608_at
Accessions : protein= NP_524557;, nucleotide= NM_079833;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // non-traceable author statement /// 0005634 //
Interpro : "0003676 // nucleic acid binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from
FlyMine data for FBgn0016685.
BDGP gene expression has embryonic in situ data for Nlp: 4 pix of staining in 1 body parts.
TRiP has 1 RNAi stocks for FBgn0016685 available for purchase.
VDRC has 2 RNAi stocks for FBgn0016685 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain448 ± 104 of 4 0.30Down
Head537 ± 174 of 4 0.40Down
Eye559 ± 114 of 4 0.38Down
Thoracicoabdominal ganglion485 ± 154 of 4 0.30Down
Salivary gland894 ± 464 of 4 0.61Down
Crop725 ± 274 of 4 0.50Down
Midgut753 ± 54 of 4 0.50Down
Tubule1281 ± 1054 of 4 0.90None
Hindgut612 ± 164 of 4 0.40Down
Heart637 ± 144 of 4 0.43Down
Fat body880 ± 1694 of 4 0.60Down
Ovary2115 ± 224 of 4 1.40Up
Testis398 ± 114 of 4 0.30Down
Male accessory glands2063 ± 1694 of 4 1.40Up
Virgin spermatheca1167 ± 424 of 4 0.79None
Mated spermatheca1462 ± 304 of 4 0.99None
Adult carcass483 ± 494 of 4 0.30Down
Larval CNS2025 ± 774 of 4 1.38Up
Larval Salivary gland2606 ± 1404 of 4 1.77Up
Larval midgut696 ± 124 of 4 0.47Down
Larval tubule1537 ± 594 of 4 1.00None
Larval hindgut1447 ± 294 of 4 0.98None
Larval fat body660 ± 664 of 4 0.40Down
Larval trachea2149 ± 1644 of 4 1.46Up
Larval carcass1193 ± 1034 of 4 0.81None
S2 cells (growing)1616 ± 154 of 4 1.10None
Whole fly1472 ± 1144 of 4

Looking for CG7917-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime