FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7935-RA through 18771 annotations produced 1 hits

moleskin (msk):

Annotation Number : CG7935
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0026252
Gbrowse : chr3L:8109277-8114681 (+) // 100.0 //
Probeset : 1625458_a_at
Accessions : protein= NP_524780;, nucleotide= NM_080041;
Pathway : 0005634 // nucleus // inferred from direct assay /// 0005643 // nuclear pore // inferred from sequence or structural sim
Interpro : 0005488 // binding // inferred from electronic annotation /// 0005515 // protein binding // inferred from physical inter
FlyMine data for FBgn0026252.
BDGP gene expression has embryonic in situ data for msk: 20 pix of staining in 30 body parts.
BioGrid reports that CG7935 interacts with CG9623 CG12559 CG12559 CG12559 CG12559 CG1004 CG12559 .
TRiP has 4 RNAi stocks for FBgn0026252 available for purchase.
VDRC has 2 RNAi stocks for FBgn0026252 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	308 ± 5	4 of 4	0.40	Down
Head	393 ± 4	4 of 4	0.50	Down
Eye	280 ± 12	4 of 4	0.36	Down
Thoracicoabdominal ganglion	351 ± 5	4 of 4	0.50	Down
Salivary gland	501 ± 12	4 of 4	0.64	Down
Crop	784 ± 21	4 of 4	1.00	None
Midgut	441 ± 5	4 of 4	0.60	Down
Tubule	585 ± 60	4 of 4	0.70	Down
Hindgut	544 ± 11	4 of 4	0.70	Down
Heart	512 ± 6	4 of 4	0.66	Down
Fat body	1059 ± 54	4 of 4	1.36	Up
Ovary	1398 ± 9	4 of 4	1.80	Up
Testis	235 ± 10	4 of 4	0.30	Down
Male accessory glands	733 ± 29	4 of 4	0.90	None
Virgin spermatheca	459 ± 41	4 of 4	0.59	Down
Mated spermatheca	702 ± 20	4 of 4	0.90	Down
Adult carcass	447 ± 11	4 of 4	0.60	Down
Larval CNS	924 ± 37	4 of 4	1.18	Up
Larval Salivary gland	679 ± 30	4 of 4	0.87	Down
Larval midgut	527 ± 29	4 of 4	0.68	Down
Larval tubule	367 ± 7	4 of 4	0.50	Down
Larval hindgut	888 ± 58	4 of 4	1.14	None
Larval fat body	381 ± 32	4 of 4	0.50	Down
Larval trachea	989 ± 70	4 of 4	1.27	Up
Larval carcass	995 ± 135	4 of 4	1.28	None
S2 cells (growing)	1121 ± 19	4 of 4	1.44	Up
Whole fly	780 ± 15	4 of 4

Looking for CG7935-RA. 1 entries matched from 18771, in 0 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720