FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7941-RA through 18771 annotations produced 2 hits

CG7941 (Cpr67Fa1):

Annotation Number : CG7941
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036108
Gbrowse : chr3L:10883095-10883804 (+) // 100.0 //
Probeset : 1624177_at
Accessions : protein= NP_648418;, nucleotide= NM_140161;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0008010
FlyMine data for FBgn0036108.
BDGP gene expression has embryonic in situ data for CG7941: 10 pix of staining in 4 body parts.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	5 ± 1	0 of 4	0.50	None
Head	8 ± 3	0 of 4	0.70	None
Eye	10 ± 2	3 of 4	0.94	None
Thoracicoabdominal ganglion	12 ± 1	0 of 4	1.10	None
Salivary gland	28 ± 6	0 of 4	2.62	None
Crop	11 ± 1	0 of 4	1.00	None
Midgut	11 ± 1	0 of 4	1.10	None
Tubule	9 ± 0	0 of 4	0.90	None
Hindgut	13 ± 1	2 of 4	1.20	None
Heart	4 ± 1	0 of 4	0.39	Down
Fat body	13 ± 5	2 of 4	1.20	None
Ovary	8 ± 0	2 of 4	0.80	None
Testis	5 ± 0	2 of 4	0.50	Down
Male accessory glands	7 ± 3	0 of 4	0.60	None
Virgin spermatheca	10 ± 0	0 of 4	1.00	None
Mated spermatheca	14 ± 2	2 of 4	1.29	None
Adult carcass	14 ± 2	0 of 4	1.30	None
Larval CNS	8 ± 1	2 of 4	0.78	None
Larval Salivary gland	11 ± 1	1 of 4	1.07	None
Larval midgut	9 ± 2	1 of 4	0.91	None
Larval tubule	12 ± 1	0 of 4	1.10	None
Larval hindgut	129 ± 38	4 of 4	11.93	None
Larval fat body	11 ± 2	1 of 4	1.00	None
Larval trachea	388 ± 108	4 of 4	35.81	Up
Larval carcass	2147 ± 364	4 of 4	197.89	Up
S2 cells (growing)	46 ± 3	4 of 4	4.32	Up
Whole fly	10 ± 0	3 of 4

CG7941 /// CG18349 (Cpr67Fa1 /// Cpr67Fa2):

Annotation Number : CG18349
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0036108 /// FBgn0036109
Gbrowse : chr3L:10884842-10885616 (+) // 100.0 //
Probeset : 1632080_s_at
Accessions : protein= NP_648418; /// NP_648419;, nucleotide= NM_140161; /// NM_140162;
Interpro : 0005214 // structural constituent of chitin-based cuticle // inferred from sequence or structural similarity /// 0005515
FlyMine data for FBgn0036108 /// FBgn0036109.
BioGrid reports that CG18349 interacts with CG18563 CG4328 CG5893 CG6688 CG7937 CG8907 .

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	1 ± 0	0 of 4	0.20	None
Head	2 ± 1	0 of 4	0.30	None
Eye	11 ± 1	3 of 4	1.34	None
Thoracicoabdominal ganglion	4 ± 1	0 of 4	0.50	None
Salivary gland	9 ± 1	0 of 4	1.15	None
Crop	1 ± 0	0 of 4	0.20	None
Midgut	5 ± 1	0 of 4	0.70	None
Tubule	1 ± 0	0 of 4	0.20	Down
Hindgut	1 ± 0	0 of 4	0.10	None
Heart	3 ± 0	0 of 4	0.45	None
Fat body	9 ± 3	0 of 4	1.11	None
Ovary	4 ± 1	0 of 4	0.60	None
Testis	6 ± 1	0 of 4	0.80	None
Male accessory glands	3 ± 1	0 of 4	0.50	None
Virgin spermatheca	6 ± 2	0 of 4	0.74	None
Mated spermatheca	6 ± 1	0 of 4	0.76	None
Adult carcass	2 ± 0	0 of 4	0.30	None
Larval CNS	5 ± 2	0 of 4	0.65	None
Larval Salivary gland	2 ± 0	0 of 4	0.26	None
Larval midgut	6 ± 1	0 of 4	0.71	None
Larval tubule	0 ± 0	0 of 4	0.10	None
Larval hindgut	336 ± 84	4 of 4	40.04	Up
Larval fat body	5 ± 1	0 of 4	0.70	None
Larval trachea	1010 ± 317	4 of 4	120.25	Up
Larval carcass	4269 ± 392	4 of 4	508.26	Up
S2 cells (growing)	35 ± 1	4 of 4	4.24	Up
Whole fly	8 ± 4	1 of 4

Looking for CG7941-RA. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720