FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG7957-RA through 18771 annotations produced 1 hits

Mediator complex subunit 17 (MED17):

Annotation Number : CG7957
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0038578
Gbrowse : chr3R:14014786-14016987 (+) // 100.0 //
Probeset : 1625217_at
Accessions : protein= NP_650686;, nucleotide= NM_142429;
Pathway : 0005634 // nucleus // inferred from sequence or structural similarity /// 0005634 // nucleus // inferred from electronic
Interpro : 0003713 // transcription coactivator activity // inferred from direct assay /// 0005515 // protein binding // inferred f
FlyMine data for FBgn0038578.
BDGP gene expression has embryonic in situ data for Trap80: 13 pix of staining in 20 body parts.
BioGrid reports that CG7957 interacts with CG9473 .
TRiP has 1 RNAi stocks for FBgn0038578 available for purchase.
VDRC has 3 RNAi stocks for FBgn0038578 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	43 ± 2	4 of 4	0.80	Down
Head	30 ± 3	4 of 4	0.50	Down
Eye	36 ± 5	4 of 4	0.66	Down
Thoracicoabdominal ganglion	45 ± 2	4 of 4	0.80	Down
Salivary gland	42 ± 2	3 of 4	0.77	Down
Crop	51 ± 3	4 of 4	0.90	None
Midgut	42 ± 1	3 of 4	0.80	Down
Tubule	38 ± 0	4 of 4	0.70	Down
Hindgut	46 ± 3	4 of 4	0.80	None
Heart	26 ± 4	4 of 4	0.48	Down
Fat body	40 ± 6	3 of 4	0.73	Down
Ovary	86 ± 1	4 of 4	1.60	Up
Testis	37 ± 1	4 of 4	0.70	Down
Male accessory glands	70 ± 7	4 of 4	1.30	None
Virgin spermatheca	48 ± 2	4 of 4	0.87	None
Mated spermatheca	46 ± 2	4 of 4	0.83	Down
Adult carcass	40 ± 5	3 of 4	0.70	None
Larval CNS	117 ± 4	4 of 4	2.13	Up
Larval Salivary gland	76 ± 8	4 of 4	1.39	None
Larval midgut	37 ± 6	2 of 4	0.69	None
Larval tubule	75 ± 2	4 of 4	1.40	Up
Larval hindgut	54 ± 4	4 of 4	0.99	None
Larval fat body	46 ± 5	4 of 4	0.80	None
Larval trachea	61 ± 12	4 of 4	1.12	None
Larval carcass	59 ± 5	4 of 4	1.08	None
S2 cells (growing)	92 ± 3	4 of 4	1.67	Up
Whole fly	55 ± 2	4 of 4

Looking for CG7957-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720