FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8010-RA through 18771 annotations produced 1 hits

(CG8010):

Annotation Number : CG8010
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0031008
Gbrowse : chrX:19160686-19162917 (-) // 100.0 //
Probeset : 1639544_at
Accessions : protein= NP_573373;, nucleotide= NM_133145;
Interpro : 0005515 // protein binding // inferred from physical interaction
FlyMine data for FBgn0031008.
BDGP gene expression has embryonic in situ data for CG8010: 23 pix of staining in 11 body parts.
VDRC has 2 RNAi stocks for FBgn0031008 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	63 ± 2	4 of 4	0.30	Down
Head	86 ± 2	4 of 4	0.40	Down
Eye	159 ± 4	4 of 4	0.67	Down
Thoracicoabdominal ganglion	70 ± 2	4 of 4	0.30	Down
Salivary gland	150 ± 9	4 of 4	0.63	Down
Crop	132 ± 3	4 of 4	0.60	Down
Midgut	111 ± 7	4 of 4	0.50	Down
Tubule	155 ± 9	4 of 4	0.70	Down
Hindgut	114 ± 6	4 of 4	0.50	Down
Heart	96 ± 9	4 of 4	0.40	Down
Fat body	108 ± 20	4 of 4	0.45	Down
Ovary	443 ± 9	4 of 4	1.90	Up
Testis	47 ± 1	4 of 4	0.20	Down
Male accessory glands	207 ± 18	4 of 4	0.90	None
Virgin spermatheca	199 ± 11	4 of 4	0.84	None
Mated spermatheca	221 ± 9	4 of 4	0.93	None
Adult carcass	119 ± 4	4 of 4	0.50	Down
Larval CNS	114 ± 6	4 of 4	0.48	Down
Larval Salivary gland	176 ± 1	4 of 4	0.74	Down
Larval midgut	89 ± 3	4 of 4	0.38	Down
Larval tubule	83 ± 4	4 of 4	0.40	Down
Larval hindgut	120 ± 12	4 of 4	0.51	Down
Larval fat body	123 ± 7	4 of 4	0.50	Down
Larval trachea	158 ± 9	4 of 4	0.67	Down
Larval carcass	142 ± 25	4 of 4	0.60	Down
S2 cells (growing)	189 ± 9	4 of 4	0.80	Down
Whole fly	238 ± 13	4 of 4

Looking for CG8010-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720