FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8039-RA through 18771 annotations produced 1 hits

mitochondrial ribosomal protein L19 (mRpL19):

Annotation Number : CG8039
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037608
Gbrowse : chr3R:4499866-4500918 (+) // 99.4 //
Probeset : 1623366_at
Accessions : protein= NP_524284;, nucleotide= NM_079560;
Pathway : 0005622 // intracellular // inferred from electronic annotation /// 0005739 // mitochondrion // inferred from electronic
Interpro : 0003735 // structural constituent of ribosome // inferred from sequence or structural similarity /// 0003735 // structur
FlyMine data for FBgn0037608.
BDGP gene expression has embryonic in situ data for mRpL19: 12 pix of staining in 15 body parts.
VDRC has 2 RNAi stocks for FBgn0037608 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	161 ± 2	4 of 4	0.90	Down
Head	116 ± 5	4 of 4	0.60	Down
Eye	107 ± 6	4 of 4	0.57	Down
Thoracicoabdominal ganglion	187 ± 9	4 of 4	1.00	None
Salivary gland	105 ± 4	4 of 4	0.55	Down
Crop	104 ± 5	4 of 4	0.50	Down
Midgut	139 ± 8	4 of 4	0.70	Down
Tubule	178 ± 10	4 of 4	0.90	None
Hindgut	143 ± 3	4 of 4	0.80	Down
Heart	168 ± 14	4 of 4	0.89	None
Fat body	169 ± 21	4 of 4	0.89	None
Ovary	308 ± 6	4 of 4	1.60	Up
Testis	108 ± 1	4 of 4	0.60	Down
Male accessory glands	107 ± 16	4 of 4	0.60	Down
Virgin spermatheca	198 ± 11	4 of 4	1.05	None
Mated spermatheca	249 ± 13	4 of 4	1.31	Up
Adult carcass	113 ± 4	4 of 4	0.60	Down
Larval CNS	252 ± 19	4 of 4	1.33	Up
Larval Salivary gland	164 ± 3	4 of 4	0.86	Down
Larval midgut	93 ± 3	4 of 4	0.49	Down
Larval tubule	127 ± 7	4 of 4	0.70	Down
Larval hindgut	197 ± 11	4 of 4	1.04	None
Larval fat body	126 ± 7	4 of 4	0.70	Down
Larval trachea	207 ± 24	4 of 4	1.09	None
Larval carcass	152 ± 10	4 of 4	0.80	Down
S2 cells (growing)	169 ± 5	4 of 4	0.89	Down
Whole fly	190 ± 2	4 of 4

Looking for CG8039-RA. 1 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720