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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8046-RA through 18771 annotations produced 1 hits



(CG8046):

Annotation Number : CG8046
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033388
Gbrowse : chr2R:5049539-5052455 (-) // 100.0 //
Probeset : 1624467_a_at
Accessions : protein= NP_610465; /// NP_724761;, nucleotide= NM_136621; /// NM_165657;
Pathway : 0009331 // glycerol-3-phosphate dehydrogenase complex // inferred from electronic annotation
Interpro : 0004368 // glycerol-3-phosphate dehydrogenase activity // inferred from electronic annotation /// 0016491 // oxidoreduct
FlyMine data for FBgn0033388.
VDRC has 1 RNAi stocks for FBgn0033388 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain5 ± 02 of 4 2.30None
Head7 ± 12 of 4 3.20Up
Eye5 ± 10 of 4 2.44None
Thoracicoabdominal ganglion3 ± 10 of 4 1.50None
Salivary gland1 ± 00 of 4 0.45None
Crop2 ± 10 of 4 1.00None
Midgut4 ± 10 of 4 1.70None
Tubule2 ± 00 of 4 1.10None
Hindgut4 ± 11 of 4 2.00None
Heart43 ± 74 of 417.98Up
Fat body6 ± 30 of 4 2.65None
Ovary2 ± 10 of 4 1.20None
Testis1 ± 00 of 4 0.70None
Male accessory glands6 ± 10 of 4 2.70None
Virgin spermatheca0 ± 00 of 4 0.38None
Mated spermatheca1 ± 00 of 4 0.40None
Adult carcass9 ± 21 of 4 3.80None
Larval CNS1 ± 00 of 4 0.47None
Larval Salivary gland2 ± 10 of 4 1.04None
Larval midgut2 ± 10 of 4 0.93None
Larval tubule2 ± 10 of 4 1.10None
Larval hindgut1 ± 10 of 4 0.73None
Larval fat body2 ± 00 of 4 0.90None
Larval trachea7 ± 01 of 4 3.10Up
Larval carcass5 ± 10 of 4 2.31None
S2 cells (growing)200 ± 124 of 483.74Up
Whole fly2 ± 10 of 4

Looking for CG8046-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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