FlyAtlas: the Drosophila gene expression atlas

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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.

This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

Searching for CG8068-RH through 18771 annotations produced 2 hits

zinc finger-containing Miz1 PIAS3-like (Su(var)2-10):

Annotation Number : CG8068
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003612
Gbrowse : chr2R:5003630-5007612 (+) // 100.0 //
Probeset : 1627362_a_at
Accessions : protein= NP_523664; /// NP_724749; /// NP_724750; /// NP_724751; /// NP_724752; /// NP_724753; /// NP_724754; /// NP_724755; /// NP_724756;, nucleotide= NM_078940; /// NM_165645; /// NM_165646; /// NM_165647; /// NM_165648; /// NM_165649; /// NM_165650; /// NM_165651; /// NM_165652;
Pathway : "0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005652 // nu
Interpro : telomeric region // inferred from direct assay"
FlyMine data for FBgn0003612.
BDGP gene expression has embryonic in situ data for Su(var)2-10: 10 pix of staining in 5 body parts.
BioGrid reports that CG8068 interacts with CG8155 CG4257 CG4257 CG14226 CG1594 CG1594 CG5993 .
TRiP has 4 RNAi stocks for FBgn0003612 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003612 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	24 ± 1	4 of 4	0.20	Down
Head	16 ± 2	4 of 4	0.20	Down
Eye	9 ± 0	2 of 4	0.09	Down
Thoracicoabdominal ganglion	16 ± 2	4 of 4	0.20	Down
Salivary gland	27 ± 2	3 of 4	0.26	Down
Crop	35 ± 3	4 of 4	0.30	Down
Midgut	22 ± 2	4 of 4	0.20	Down
Tubule	45 ± 3	4 of 4	0.40	Down
Hindgut	26 ± 1	4 of 4	0.20	Down
Heart	10 ± 1	4 of 4	0.10	Down
Fat body	22 ± 4	4 of 4	0.21	Down
Ovary	429 ± 11	4 of 4	4.10	Up
Testis	6 ± 1	3 of 4	0.10	Down
Male accessory glands	35 ± 4	4 of 4	0.30	Down
Virgin spermatheca	14 ± 1	3 of 4	0.13	Down
Mated spermatheca	16 ± 2	3 of 4	0.15	Down
Adult carcass	21 ± 4	2 of 4	0.20	Down
Larval CNS	88 ± 8	4 of 4	0.84	Down
Larval Salivary gland	46 ± 6	4 of 4	0.44	Down
Larval midgut	19 ± 2	4 of 4	0.19	Down
Larval tubule	43 ± 3	4 of 4	0.40	Down
Larval hindgut	45 ± 2	4 of 4	0.43	Down
Larval fat body	31 ± 0	4 of 4	0.30	Down
Larval trachea	35 ± 3	4 of 4	0.33	Down
Larval carcass	31 ± 0	4 of 4	0.30	Down
S2 cells (growing)	87 ± 2	4 of 4	0.83	Down
Whole fly	104 ± 4	4 of 4

zinc finger-containing Miz1 PIAS3-like (Su(var)2-10):

Annotation Number : CG8068
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003612
Gbrowse : chr2R:5003630-5007610 (+) // 100.0 //
Probeset : 1632783_a_at
Accessions : protein= NP_523664; /// NP_724749; /// NP_724750; /// NP_724751; /// NP_724752; /// NP_724753; /// NP_724754; /// NP_724755; /// NP_724756;, nucleotide= NM_078940; /// NM_165645; /// NM_165646; /// NM_165647; /// NM_165648; /// NM_165649; /// NM_165650; /// NM_165651; /// NM_165652;
Pathway : "0005634 // nucleus // inferred from direct assay /// 0005634 // nucleus // traceable author statement /// 0005652 // nu
Interpro : telomeric region // inferred from direct assay"
FlyMine data for FBgn0003612.
BDGP gene expression has embryonic in situ data for Su(var)2-10: 10 pix of staining in 5 body parts.
BioGrid reports that CG8068 interacts with CG8155 CG4257 CG4257 CG14226 CG1594 CG1594 CG5993 .
TRiP has 4 RNAi stocks for FBgn0003612 available for purchase.
VDRC has 3 RNAi stocks for FBgn0003612 available for purchase.

Tissue	mRNA Signal	Present Call	Enrichment	Affy Call
Brain	84 ± 5	4 of 4	0.40	Down
Head	37 ± 2	4 of 4	0.20	Down
Eye	22 ± 1	4 of 4	0.09	Down
Thoracicoabdominal ganglion	45 ± 5	4 of 4	0.20	Down
Salivary gland	47 ± 4	3 of 4	0.20	Down
Crop	41 ± 5	4 of 4	0.20	Down
Midgut	38 ± 2	4 of 4	0.20	Down
Tubule	24 ± 1	0 of 4	0.10	Down
Hindgut	33 ± 1	4 of 4	0.10	Down
Heart	18 ± 1	4 of 4	0.08	Down
Fat body	29 ± 5	4 of 4	0.12	Down
Ovary	571 ± 10	4 of 4	2.40	Up
Testis	206 ± 6	4 of 4	0.90	None
Male accessory glands	39 ± 4	1 of 4	0.20	Down
Virgin spermatheca	13 ± 1	1 of 4	0.05	Down
Mated spermatheca	13 ± 0	0 of 4	0.06	Down
Adult carcass	31 ± 3	4 of 4	0.10	Down
Larval CNS	131 ± 2	4 of 4	0.55	Down
Larval Salivary gland	75 ± 6	4 of 4	0.32	Down
Larval midgut	38 ± 3	4 of 4	0.16	Down
Larval tubule	59 ± 5	4 of 4	0.20	Down
Larval hindgut	40 ± 2	4 of 4	0.17	Down
Larval fat body	49 ± 10	3 of 4	0.20	Down
Larval trachea	40 ± 2	4 of 4	0.17	Down
Larval carcass	32 ± 1	4 of 4	0.14	Down
S2 cells (growing)	169 ± 2	4 of 4	0.71	Down
Whole fly	239 ± 16	4 of 4

Looking for CG8068-RH. 2 entries matched from 18771, in 1 s.

Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720