Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8070-RA through 18771 annotations produced 1 hits



Mystery 45A (Mys45A):

Annotation Number : CG8070
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0033379
Gbrowse : chr2R:4999005-5001458 (-) // 100.0 //
Probeset : 1639288_at
Accessions : protein= NP_610455;, nucleotide= NM_136611;
Pathway : 0005634 // nucleus // inferred from electronic annotation /// 0005730 // nucleolus // inferred from sequence or structur
Interpro : 0005488 // binding // inferred from electronic annotation
FlyMine data for FBgn0033379.
BDGP gene expression has embryonic in situ data for Mys45A: 4 pix of staining in 1 body parts.
VDRC has 3 RNAi stocks for FBgn0033379 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain67 34 of 4 0.60Down
Head68 44 of 4 0.60Down
Eye50 34 of 4 0.44Down
Thoracicoabdominal ganglion66 14 of 4 0.60Down
Salivary gland126 54 of 4 1.09None
Crop130 24 of 4 1.10Up
Midgut79 34 of 4 0.70Down
Tubule114 104 of 4 1.00None
Hindgut82 14 of 4 0.70Down
Heart76 14 of 4 0.66Down
Fat body115 104 of 4 1.00None
Ovary246 64 of 4 2.10Up
Testis47 14 of 4 0.40Down
Male accessory glands155 64 of 4 1.30Up
Virgin spermatheca97 114 of 4 0.84None
Mated spermatheca144 34 of 4 1.25Up
Adult carcass82 74 of 4 0.70Down
Larval CNS153 44 of 4 1.32Up
Larval Salivary gland156 84 of 4 1.35Up
Larval midgut67 74 of 4 0.58Down
Larval tubule51 44 of 4 0.40Down
Larval hindgut99 114 of 4 0.86None
Larval fat body37 34 of 4 0.30Down
Larval trachea138 154 of 4 1.19None
Larval carcass116 284 of 4 1.01None
S2 cells (growing)114 24 of 4 0.99None
Whole fly115 24 of 4

Looking for CG8070-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime