Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8095-RB through 18771 annotations produced 1 hits



volado (scb):

Annotation Number : CG8095
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0003328
Gbrowse : chr2R:11136289-11146003 (+) // 100.0 //
Probeset : 1629803_a_at
Accessions : protein= NP_523750; /// NP_725445;, nucleotide= NM_079026; /// NM_166083;
Pathway : engulfment // inferred from mutant phenotype /// 0007155 // cell adhesion // inferred from physical interaction /// 000
Interpro : 0005886 // plasma membrane // inferred from sequence or structural similarity /// 0005925 // focal adhesion // inferred
FlyMine data for FBgn0003328.
Homophila reports that CG8095 is a close match (1e-20) to human gene (NP_000878), a gene associated with .
BioGrid reports that CG8095 interacts with CG1560 .
TRiP has 2 RNAi stocks for FBgn0003328 available for purchase.
VDRC has 2 RNAi stocks for FBgn0003328 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain65 54 of 4 0.50Down
Head57 54 of 4 0.50Down
Eye83 34 of 4 0.68Down
Thoracicoabdominal ganglion71 34 of 4 0.60Down
Salivary gland144 74 of 4 1.19Up
Crop140 34 of 4 1.20Up
Midgut643 274 of 4 5.30Up
Tubule305 134 of 4 2.50Up
Hindgut191 24 of 4 1.60Up
Heart82 194 of 4 0.68None
Fat body51 134 of 4 0.43Down
Ovary84 24 of 4 0.70Down
Testis109 54 of 4 0.90None
Male accessory glands540 544 of 4 4.50Up
Virgin spermatheca61 44 of 4 0.51Down
Mated spermatheca67 44 of 4 0.55Down
Adult carcass39 24 of 4 0.30Down
Larval CNS127 124 of 4 1.05None
Larval Salivary gland537 394 of 4 4.43Up
Larval midgut1223 454 of 410.08Up
Larval tubule475 154 of 4 3.90Up
Larval hindgut701 214 of 4 5.78Up
Larval fat body28 34 of 4 0.20Down
Larval trachea368 314 of 4 3.04Up
Larval carcass229 284 of 4 1.89Up
S2 cells (growing)23 12 of 4 0.19Down
Whole fly121 64 of 4

Looking for CG8095-RB. 1 entries matched from 18771, in 2 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime