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FlyAtlas: the Drosophila gene expression atlas

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Biotechnology & Biological Sciences Research Council
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Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8110-RA through 18771 annotations produced 1 hits



sunday driver (syd):

Annotation Number : CG8110
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0024187
Gbrowse : chr3L:7919691-7929063 (-) // 100.0 //
Probeset : 1632129_a_at
Accessions : protein= NP_001163373; /// NP_001163374; /// NP_524652; /// NP_729311;, nucleotide= NM_001169902; /// NM_001169903; /// NM_079913; /// NM_168245;
Pathway : 0000139 // Golgi membrane // inferred from sequence or structural similarity /// 0005737 // cytoplasm // inferred from e
Interpro : 0005078 // MAP-kinase scaffold activity // inferred from sequence or structural similarity /// 0019894 // kinesin bindin
FlyMine data for FBgn0024187.
BDGP gene expression has embryonic in situ data for syd: 4 pix of staining in 1 body parts.
Homophila reports that CG8110 is a close match (4e-22) to human gene ARHGEF10;KIAA0294 (NP_055444), a gene associated with Slowed nerve conduction velocity, AD, 608236 (3).
BioGrid reports that CG8110 interacts with CG5433 .
VDRC has 3 RNAi stocks for FBgn0024187 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain126 54 of 4 3.30Up
Head66 84 of 4 1.70Up
Eye37 34 of 4 0.96None
Thoracicoabdominal ganglion90 94 of 4 2.40Up
Salivary gland98 50 of 4 2.54Up
Crop50 23 of 4 1.30Up
Midgut66 33 of 4 1.70Up
Tubule37 11 of 4 1.00None
Hindgut53 54 of 4 1.40Up
Heart24 14 of 4 0.64Down
Fat body48 113 of 4 1.25None
Ovary37 24 of 4 1.00None
Testis18 11 of 4 0.50Down
Male accessory glands330 354 of 4 8.60Up
Virgin spermatheca33 20 of 4 0.86None
Mated spermatheca31 20 of 4 0.82None
Adult carcass55 71 of 4 1.40None
Larval CNS54 114 of 4 1.41None
Larval Salivary gland61 51 of 4 1.60Up
Larval midgut53 20 of 4 1.39Up
Larval tubule52 10 of 4 1.40Up
Larval hindgut41 42 of 4 1.07None
Larval fat body38 20 of 4 1.00None
Larval trachea14 30 of 4 0.37Down
Larval carcass43 81 of 4 1.12None
S2 cells (growing)90 24 of 4 2.36Up
Whole fly38 24 of 4

Looking for CG8110-RA. 1 entries matched from 18771, in 1 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

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