Flyatlas logo

FlyAtlas: the Drosophila gene expression atlas

University of Glasgow
Biotechnology & Biological Sciences Research Council
Home & Search
Batch/table Search
Tissues Search
BLASTP Search
About & FAQ
Top 50
Original data
Interesting meta-analysis
Links

Latest news: FlyAtlas2 : A Database web-app for fruitfly expression with added RNA & miRNA goodness ! Click here to visit the application. Read all about it here.


This dataset was generated by Venkat Chintapalli, Jing Wang & Julian Dow at the University of Glasgow with funding from the UK's BBSRC.
It gives you a quick answer to the question: where is my gene of interest expressed/enriched in the adult fly?
For each gene & tissue, you're given the mRNA SIGNAL (how abundant the mRNA is), the mRNA ENRICHMENT (compared to whole flies), and the Affymetrix PRESENT CALL (out of 4 arrays, how many times it was detectably expressed).

String to look for? (e.g. vha, cell adhesion, receptor, aquaporin, adenylate, CG1147, pnt)


Searching for CG8112-RA through 18771 annotations produced 1 hits



(CG8112):

Annotation Number : CG8112
FlyAtlas2 : Click Here for expression data based on RNA-Seq and or miRNA-Seq analyses
Flybase ID : FBgn0037612
Gbrowse : chr3R:4526703-4540990 (+) // 100.0 //
Probeset : 1636353_s_at
Accessions : protein= NP_649816;, nucleotide= NM_141559;
Pathway : 0016020 // membrane // inferred from electronic annotation /// 0016021 // integral to membrane // inferred from electron
Interpro : 0004772 // sterol O-acyltransferase activity // inferred from sequence or structural similarity /// 0008415 // acyltrans
FlyMine data for FBgn0037612.
BDGP gene expression has embryonic in situ data for CG8112: 8 pix of staining in 6 body parts.
VDRC has 3 RNAi stocks for FBgn0037612 available for purchase.


TissuemRNA SignalPresent CallEnrichmentAffy Call
Brain164 ± 74 of 4 0.80Down
Head454 ± 464 of 4 2.20Up
Eye207 ± 234 of 4 0.99None
Thoracicoabdominal ganglion209 ± 84 of 4 1.00None
Salivary gland16 ± 31 of 4 0.08Down
Crop16 ± 14 of 4 0.10Down
Midgut550 ± 334 of 4 2.60Up
Tubule213 ± 124 of 4 1.00None
Hindgut57 ± 34 of 4 0.30Down
Heart237 ± 484 of 4 1.13None
Fat body250 ± 14 of 4 1.19Up
Ovary288 ± 54 of 4 1.40Up
Testis20 ± 04 of 4 0.10Down
Male accessory glands46 ± 24 of 4 0.20Down
Virgin spermatheca92 ± 124 of 4 0.44Down
Mated spermatheca436 ± 584 of 4 2.07Up
Adult carcass233 ± 134 of 4 1.10None
Larval CNS66 ± 14 of 4 0.32Down
Larval Salivary gland12 ± 23 of 4 0.06Down
Larval midgut318 ± 614 of 4 1.51None
Larval tubule803 ± 564 of 4 3.80Up
Larval hindgut39 ± 24 of 4 0.19Down
Larval fat body1832 ± 2924 of 4 8.70Up
Larval trachea315 ± 984 of 4 1.50None
Larval carcass67 ± 54 of 4 0.32Down
S2 cells (growing)190 ± 74 of 4 0.90None
Whole fly210 ± 124 of 4

Looking for CG8112-RA. 1 entries matched from 18771, in 0 s.


Chintapalli, V. R., Wang, J. and Dow, J. A. T. (2007). Using FlyAtlas to identify better Drosophila models of human disease. Nature Genetics 39: 715-720

measure downtime